RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 GPIHBP1Q8IV16 184 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 YAF2Q8IY57 180 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 OR10T2Q8NGX3 314 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 TSPAN18Q96SJ8 248 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 TMEM209Q96SK2 561 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 TCHPQ9BT92 498 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 TIPINQ9BVW5 301 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 TMEM121BQ9BXQ6 578 aaPredicted RBP13.27□□□□□ -0.29
UBR4-211ENST00000467272 ARRDC1-AS1Q9H2J1 176 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 SLITRK6Q9H5Y7 841 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 TASP1Q9H6P5 420 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 HPS4Q9NQG7 708 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 DNM3Q9UQ16 869 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 SLC27A5Q9Y2P5 690 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 PCDHGA5Q9Y5G8 931 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 GREB1Q4ZG55 1949 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 SFI1A8K8P3 1242 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 RPP40O75818 363 aaKnown RBP13.26□□□□□ -0.29
UBR4-211ENST00000467272 SOAT2O75908 522 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 PLS3P13797 630 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 MARCKSP29966 332 aaPredicted RBP13.26□□□□□ -0.29
UBR4-211ENST00000467272 CDC25AP30304 524 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 TNFSF9P41273 254 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 ENOX2Q16206 610 aaKnown RBP13.26□□□□□ -0.29
UBR4-211ENST00000467272 ITPRIPL2Q3MIP1 535 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 SPATA1Q5VX52 437 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 OVOS1Q6IE37 1185 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 SDK1Q7Z5N4 2213 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 TTC8Q8TAM2 541 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 RIN3Q8TB24 985 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 BPIFB1Q8TDL5 484 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 NUP210Q8TEM1 1887 aaPredicted RBP13.26□□□□□ -0.29
UBR4-211ENST00000467272 SNX29Q8TEQ0 813 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 SLC46A2Q9BY10 475 aa13.26□□□□□ -0.29
UBR4-211ENST00000467272 FBRSL1Q9HCM7 1045 aaKnown RBP13.26□□□□□ -0.29
UBR4-211ENST00000467272 UBQLN1Q9UMX0 589 aaKnown RBP13.26□□□□□ -0.29
UBR4-211ENST00000467272 SMG1Q96Q15 3661 aaKnown RBP13.26□□□□□ -0.29
UBR4-211ENST00000467272 ANO9A1A5B4 782 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 LACTBL1A8MY62 500 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 PIRO00625 290 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 AXIN1O15169 862 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 CLDN3O15551 220 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 KCNK5O95279 499 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 PIGRP01833 764 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 PROS1P07225 676 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 PAX3P23760 479 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 GABRR2P28476 465 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 PRPHP41219 470 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 ALDH1A3P47895 512 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 MCM2P49736 904 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 GUCY2FP51841 1108 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 NCKAP1LP55160 1127 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 SPAG1Q07617 926 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 SAFBQ15424 915 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBR4-211ENST00000467272 CCDC6Q16204 474 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 GPR158Q5T848 1215 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 IL31Q6EBC2 164 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 CEP68Q76N32 757 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 CAMKK1Q8N5S9 505 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 KCTD17Q8N5Z5 321 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 EZH1Q92800 747 aaPredicted RBP13.25□□□□□ -0.29
UBR4-211ENST00000467272 PNMA5Q96PV4 448 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 LLPHQ9BRT6 129 aaKnown RBP13.25□□□□□ -0.29
UBR4-211ENST00000467272 ZCWPW1Q9H0M4 648 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 ATXN3LQ9H3M9 355 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 ANKFY1Q9P2R3 1169 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 TBX20Q9UMR3 447 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 PCDHB6Q9Y5E3 794 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 CITO14578 2027 aa13.25□□□□□ -0.29
UBR4-211ENST00000467272 SOBPA7XYQ1 873 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 HARSP12081 509 aaKnown RBP13.24□□□□□ -0.29
UBR4-211ENST00000467272 HMGA1P17096 107 aaKnown RBP13.24□□□□□ -0.29
UBR4-211ENST00000467272 PXNP49023 591 aaPredicted RBP13.24□□□□□ -0.29
UBR4-211ENST00000467272 SLC12A3P55017 1021 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 PLK5Q496M5 336 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 AASDHQ4L235 1098 aaPredicted RBP13.24□□□□□ -0.29
UBR4-211ENST00000467272 ARSHQ5FYA8 562 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 HAUS6Q7Z4H7 955 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 ITIH5Q86UX2 942 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 LRRTM3Q86VH5 581 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 CMTM8Q8IZV2 173 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 SYT2Q8N9I0 419 aaPredicted RBP13.24□□□□□ -0.29
UBR4-211ENST00000467272 KIF12Q96FN5 646 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 CHAMP1Q96JM3 812 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 C8orf76Q96K31 380 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 SENP8Q96LD8 212 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 LPIN3Q9BQK8 851 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 CCSER1Q9C0I3 900 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 SMG9Q9H0W8 520 aaKnown RBP13.24□□□□□ -0.29
UBR4-211ENST00000467272 DUSP15Q9H1R2 295 aaPredicted RBP13.24□□□□□ -0.29
UBR4-211ENST00000467272 POLR3BQ9NW08 1133 aaPredicted RBP13.24□□□□□ -0.29
UBR4-211ENST00000467272 EBF1Q9UH73 591 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 KCNG1Q9UIX4 513 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 ZMYM5Q9UJ78 669 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 RALYQ9UKM9 306 aaKnown RBP13.24□□□□□ -0.29
UBR4-211ENST00000467272 CCL26Q9Y258 94 aa13.24□□□□□ -0.29
UBR4-211ENST00000467272 TSC2P49815 1807 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 A0A0B4J269 797 aa13.23□□□□□ -0.29
UBR4-211ENST00000467272 LAD1O00515 517 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms