RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 JADE1Q6IE81 842 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 LINC01465Q8N7H1 131 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 PPTC7Q8NI37 304 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 BCAS4Q8TDM0 211 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 BRI3BPQ8WY22 251 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 MCEEQ96PE7 176 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 NFKBIZQ9BYH8 718 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 DCLK3Q9C098 648 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 VTA1Q9NP79 307 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 CWC15Q9P013 229 aaKnown RBP12.12□□□□□ -0.47
HPS1-208ENST00000467246 NOVA2Q9UNW9 492 aaKnown RBP12.12□□□□□ -0.47
HPS1-208ENST00000467246 F8VP50 259 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 PI4K2BG5E9Z4 385 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 LSM8O95777 96 aaKnown RBP12.12□□□□□ -0.47
HPS1-208ENST00000467246 ITGB3P05106 788 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 ADCY2Q08462 1091 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 ICE2Q659A1 982 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 KATNAL2Q8IYT4 538 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 SLCO2A1Q92959 643 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 OSBPL8Q9BZF1 889 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 SDCBP2Q9H190 292 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 PDZD7Q9H5P4 517 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 MTRF1LQ9UGC7 380 aaKnown RBP12.12□□□□□ -0.47
HPS1-208ENST00000467246 PARP2Q9UGN5 583 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 IP6K2Q9UHH9 426 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 MGAMO43451 1857 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 CALB1P05937 261 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 CETPP11597 493 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 CD19P15391 556 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 ARF4P18085 180 aaPredicted RBP12.11□□□□□ -0.47
HPS1-208ENST00000467246 FGFR4P22455 802 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 GBP1P32455 592 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 LACTBP83111 547 aaPredicted RBP12.11□□□□□ -0.47
HPS1-208ENST00000467246 SPDYCQ5MJ68 293 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 PPP1R2P3Q6NXS1 205 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 DENND1BQ6P3S1 775 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 DNAJC24Q6P3W2 148 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 UHMK1Q8TAS1 419 aaKnown RBP12.11□□□□□ -0.47
HPS1-208ENST00000467246 TJP2Q9UDY2 1190 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 ASIC3Q9UHC3 531 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 IVNS1ABPQ9Y6Y0 642 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 RBM47A0AV96 593 aaKnown RBP12.11□□□□□ -0.47
HPS1-208ENST00000467246 H3BRB1 525 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 MAGEB2O15479 319 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 CAND2O75155 1236 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
HPS1-208ENST00000467246 IL18RAPO95256 599 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 IBSPP21815 317 aaPredicted RBP12.11□□□□□ -0.47
HPS1-208ENST00000467246 EIF4BP23588 611 aaKnown RBP12.11□□□□□ -0.47
HPS1-208ENST00000467246 IVDP26440 423 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 SLC10A6Q3KNW5 377 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 ZNF667Q5HYK9 610 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 DENND2CQ68D51 928 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 TXNRD3NBQ6F5E7 133 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 DCUN1D2Q6PH85 259 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 ERICH1Q86X53 443 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 EXD1Q8NHP7 514 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 CXorf38Q8TB03 319 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 MAIP1Q8WWC4 291 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 ACSF2Q96CM8 615 aaPredicted RBP12.11□□□□□ -0.47
HPS1-208ENST00000467246 TUT1Q9H6E5 874 aaKnown RBP12.11□□□□□ -0.47
HPS1-208ENST00000467246 HMGXB4Q9UGU5 601 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 CYTH4Q9UIA0 394 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 PCDHGC3Q9UN70 934 aa12.11□□□□□ -0.47
HPS1-208ENST00000467246 ITGBL1O95965 494 aaPredicted RBP12.1□□□□□ -0.47
HPS1-208ENST00000467246 NUDT17P0C025 328 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 KRT10P13645 584 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 CDH5P33151 784 aaPredicted RBP12.1□□□□□ -0.47
HPS1-208ENST00000467246 LSP1P33241 339 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 MAN1A1P33908 653 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 MDH1P40925 334 aaKnown RBP12.1□□□□□ -0.47
HPS1-208ENST00000467246 VPS41P49754 854 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 POU5F1BQ06416 359 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 CALCOCO2Q13137 446 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 FAM187BQ17R55 369 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 ODF2Q5BJF6 829 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 MTHFD1LQ6UB35 978 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 DPP9Q86TI2 863 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 CCDC25Q86WR0 208 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 GTF3C2Q8WUA4 911 aaPredicted RBP12.1□□□□□ -0.47
HPS1-208ENST00000467246 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 CCDC114Q96M63 670 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 TWNKQ96RR1 684 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 ZNF518BQ9C0D4 1074 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 SMYD3Q9H7B4 428 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 ANK1P16157 1881 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 MCF2P10911 925 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 SMPD1P17405 629 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 CCT5P48643 541 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 RAD23BP54727 409 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 EIF3BP55884 814 aaKnown RBP12.1□□□□□ -0.47
HPS1-208ENST00000467246 MAGOHP61326 146 aaKnown RBP12.1□□□□□ -0.47
HPS1-208ENST00000467246 NFX1Q12986 1120 aaKnown RBP12.1□□□□□ -0.47
HPS1-208ENST00000467246 TTC31Q49AM3 519 aaPredicted RBP12.1□□□□□ -0.47
HPS1-208ENST00000467246 PTPN20Q4JDL3 420 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 PPP1R15BQ5SWA1 713 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 MARCH8Q5T0T0 291 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 ZFYVE27Q5T4F4 411 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 AGBL2Q5U5Z8 902 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 PRUNE1Q86TP1 453 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms