RNA–Protein interactions for RNA: ENST00000466881.1

PLOD3-211, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-211ENST00000466881 BEST2Q8NFU1 509 aa12.95□□□□□ -0.34
PLOD3-211ENST00000466881 SHC3Q92529 594 aa12.95□□□□□ -0.34
PLOD3-211ENST00000466881 TAF4BQ92750 862 aa12.95□□□□□ -0.34
PLOD3-211ENST00000466881 KLF16Q9BXK1 252 aaPredicted RBP12.95□□□□□ -0.34
PLOD3-211ENST00000466881 APOBEC3GQ9HC16 384 aaKnown RBP12.95□□□□□ -0.34
PLOD3-211ENST00000466881 FAM105AQ9NUU6 356 aa12.95□□□□□ -0.34
PLOD3-211ENST00000466881 NXF1Q9UBU9 619 aaKnown RBP12.95□□□□□ -0.34
PLOD3-211ENST00000466881 AGAP1Q9UPQ3 857 aa12.95□□□□□ -0.34
PLOD3-211ENST00000466881 DERAQ9Y315 318 aa12.95□□□□□ -0.34
PLOD3-211ENST00000466881 REXO2Q9Y3B8 237 aaKnown RBP12.95□□□□□ -0.34
PLOD3-211ENST00000466881 C2CD2Q9Y426 696 aa12.95□□□□□ -0.34
PLOD3-211ENST00000466881 ANK1P16157 1881 aa12.95□□□□□ -0.34
PLOD3-211ENST00000466881 UMODL1Q5DID0 1318 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 A0A087X0T9 212 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 A0A0U1RQJ8 604 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 XPOTO43592 962 aaKnown RBP12.94□□□□□ -0.34
PLOD3-211ENST00000466881 KIF5CO60282 957 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 PQBP1O60828 265 aaKnown RBP12.94□□□□□ -0.34
PLOD3-211ENST00000466881 SGPL1O95470 568 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 FAM228BP0C875 321 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 CDK7P50613 346 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 KIF5AQ12840 1032 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 BFSP2Q13515 415 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 SLC18A3Q16572 532 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 CCDC122Q5T0U0 273 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 PPP1R26Q5T8A7 1209 aaPredicted RBP12.94□□□□□ -0.34
PLOD3-211ENST00000466881 SCARA5Q6ZMJ2 495 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 TMEM130Q8N3G9 435 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 C1orf127Q8N9H9 656 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 SMG8Q8ND04 991 aaKnown RBP12.94□□□□□ -0.34
PLOD3-211ENST00000466881 U2AF1L4Q8WU68 220 aaKnown RBP12.94□□□□□ -0.34
PLOD3-211ENST00000466881 ATRIPQ8WXE1 791 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 HPDLQ96IR7 371 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 AGPAT1Q99943 283 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 ADAM2Q99965 735 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 OSBPL7Q9BZF2 842 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 NIF3L1Q9GZT8 377 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 RNF19AQ9NV58 838 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 ITGA11Q9UKX5 1188 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 GUCA1BQ9UMX6 200 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 TFR2Q9UP52 801 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 DOLKQ9UPQ8 538 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 PCDHB11Q9Y5F2 797 aa12.94□□□□□ -0.34
PLOD3-211ENST00000466881 RANBP2P49792 3224 aaKnown RBP12.94□□□□□ -0.34
PLOD3-211ENST00000466881 CITO14578 2027 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 ZNF263O14978 683 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 KRT86O43790 486 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 LCA5LO95447 670 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 P4HA1P13674 534 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 SELPP16109 830 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 CD58P19256 250 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 ANXA13P27216 316 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 ATICP31939 592 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 PDE6CP51160 858 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 VAV2P52735 878 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 BPIFB4P59827 614 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 GNG11P61952 73 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 YWHAEP62258 255 aaKnown RBP12.93□□□□□ -0.34
PLOD3-211ENST00000466881 MYO1EQ12965 1108 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 ASTE1Q2TB18 679 aaPredicted RBP12.93□□□□□ -0.34
PLOD3-211ENST00000466881 WDR72Q3MJ13 1102 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 TAF3Q5VWG9 929 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.93□□□□□ -0.34
PLOD3-211ENST00000466881 FAM126BQ8IXS8 530 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 RPUSD2Q8IZ73 545 aaKnown RBP12.93□□□□□ -0.34
PLOD3-211ENST00000466881 CAGE1Q8TC20 777 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 ZMAT2Q96NC0 199 aaKnown RBP12.93□□□□□ -0.34
PLOD3-211ENST00000466881 RPS6KC1Q96S38 1066 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 TSGA10Q9BZW7 698 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 CXCL16Q9H2A7 254 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 PDCL3Q9H2J4 239 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 CNTN3Q9P232 1028 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 PUF60Q9UHX1 559 aaKnown RBP12.93□□□□□ -0.34
PLOD3-211ENST00000466881 SIX4Q9UIU6 781 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 UBQLN1Q9UMX0 589 aaKnown RBP12.93□□□□□ -0.34
PLOD3-211ENST00000466881 POLIQ9UNA4 740 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 SQORQ9Y6N5 450 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 WASF2Q9Y6W5 498 aa12.93□□□□□ -0.34
PLOD3-211ENST00000466881 SMIM28A0A1B0GU29 152 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 TMCO5BA8MYB1 307 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 DCDC2CA8MYV0 355 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 CD4P01730 458 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 TUBB4AP04350 444 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 WEE2P0C1S8 567 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 RAB27AP51159 221 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 NAP1L1P55209 391 aaKnown RBP12.92□□□□□ -0.34
PLOD3-211ENST00000466881 TNNC1P63316 161 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 BMS1Q14692 1282 aaKnown RBP12.92□□□□□ -0.34
PLOD3-211ENST00000466881 C10orf76Q5T2E6 689 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 ALKBH5Q6P6C2 394 aaKnown RBP12.92□□□□□ -0.34
PLOD3-211ENST00000466881 TMEM270Q6UE05 265 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 ALKAL1Q6UXT8 129 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 SYT10Q6XYQ8 523 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 SLC39A5Q6ZMH5 540 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 LRRC8DQ7L1W4 858 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 SLC47A2Q86VL8 602 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 GLYCTKQ8IVS8 523 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 RBBP8NLQ8NC74 664 aaPredicted RBP12.92□□□□□ -0.34
PLOD3-211ENST00000466881 SLC20A1Q8WUM9 679 aa12.92□□□□□ -0.34
PLOD3-211ENST00000466881 HPS1Q92902 700 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms