RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SLC35A4Q96G79 324 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 CDK5RAP3Q96JB5 506 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 CNPPD1Q9BV87 410 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 TINAGL1Q9GZM7 467 aaPredicted RBP5□□□□□ -1.61
VPS13D-203ENST00000466732 SIK2Q9H0K1 926 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 RIOX1Q9H6W3 641 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5□□□□□ -1.61
VPS13D-203ENST00000466732 FOXJ2Q9P0K8 574 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 LRIT1Q9P2V4 623 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 STXBP5LQ9Y2K9 1186 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 ZBTB32Q9Y2Y4 487 aaPredicted RBP5□□□□□ -1.61
VPS13D-203ENST00000466732 OVOL3O00110 214 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 YY2O15391 372 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 PROM1O43490 865 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 KIF20AO95235 890 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 GNAI2P04899 355 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 HSPA6P17066 643 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 IL12RB1P42701 662 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 NPTX2P47972 431 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 SIM1P81133 766 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-203ENST00000466732 EXOSC9Q06265 439 aaKnown RBP4.99□□□□□ -1.61
VPS13D-203ENST00000466732 TCF15Q12870 199 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 KIAA0895LQ68EN5 471 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 TAF2Q6P1X5 1199 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 B3GNT9Q6UX72 402 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 TSHZ1Q6ZSZ6 1077 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 PPP1R32Q7Z5V6 425 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 PSD4Q8NDX1 1056 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 KLHDC4Q8TBB5 520 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 BRIX1Q8TDN6 353 aaKnown RBP4.99□□□□□ -1.61
VPS13D-203ENST00000466732 ACTRT2Q8TDY3 377 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 LRGUKQ96M69 825 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 SMOC2Q9H3U7 446 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 NMRK2Q9NPI5 230 aa4.99□□□□□ -1.61
VPS13D-203ENST00000466732 SPATA31A3Q5VYP0 1347 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 M0QYG6 137 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 VPS4BO75351 444 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 PPP3CBP16298 524 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 HDCP19113 662 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 CHRM3P20309 590 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 RARRES1P49788 294 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 HNRNPMP52272 730 aaKnown RBP eCLIP4.98□□□□□ -1.61
VPS13D-203ENST00000466732 GTF2H3Q13889 308 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 STRIP1Q5VSL9 837 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 EPM2AIP1Q7L775 607 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-203ENST00000466732 DENND1CQ8IV53 801 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 FAM9AQ8IZU1 332 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-203ENST00000466732 CAMKK1Q8N5S9 505 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 TOR1AIP2Q8NFQ8 470 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 PLBD2Q8NHP8 589 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 SLC35G2Q8TBE7 412 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 MYCBPAPQ8TBZ2 947 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 CAGE1Q8TC20 777 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 DDX17Q92841 729 aaKnown RBP4.98□□□□□ -1.61
VPS13D-203ENST00000466732 PDLIM2Q96JY6 352 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 CRAMP1Q96RY5 1269 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 ARMT1Q9H993 441 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 RSAD1Q9HA92 442 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 ANLNQ9NQW6 1124 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 PCDHA6Q9UN73 950 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 INSL6Q9Y581 213 aa4.98□□□□□ -1.61
VPS13D-203ENST00000466732 A0A0B4J269 797 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 F5H697 171 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 H3BML4 177 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 MGST3O14880 152 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 MPPED1O15442 326 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 NDUFV1P49821 464 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 TOB1P50616 345 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-203ENST00000466732 SOX8P57073 446 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 TUBB3Q13509 450 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 KHDC1LQ5JSQ8 128 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 EMC10Q5UCC4 262 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 CELF5Q8N6W0 485 aaKnown RBP4.97□□□□□ -1.61
VPS13D-203ENST00000466732 FAM46DQ8NEK8 389 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 PPP1R35Q8TAP8 253 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 FBXL20Q96IG2 436 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 PGBD1Q96JS3 809 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 TAAR9Q96RI9 348 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 PRDM13Q9H4Q3 707 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 SARS2Q9NP81 518 aaKnown RBP4.97□□□□□ -1.61
VPS13D-203ENST00000466732 GABBR1Q9UBS5 961 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 TLK1Q9UKI8 766 aa4.97□□□□□ -1.61
VPS13D-203ENST00000466732 A0A088AWK7 358 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 TRIAP1O43715 76 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 PPFIA2O75334 1257 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 SOAT2O75908 522 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 UBXN7O94888 489 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 S100BP04271 92 aaPredicted RBP4.96□□□□□ -1.62
VPS13D-203ENST00000466732 HTR1BP28222 390 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 PTH2RP49190 550 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 RAB1AP62820 205 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 BOP1Q14137 746 aaKnown RBP4.96□□□□□ -1.62
VPS13D-203ENST00000466732 PTPRRQ15256 657 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 FAM160B1Q5W0V3 765 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 KAZNQ674X7 775 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 PRIMA1Q86XR5 153 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 PCSK9Q8NBP7 692 aaKnown RBP4.96□□□□□ -1.62
VPS13D-203ENST00000466732 B3GALNT2Q8NCR0 500 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 TFAP2BQ92481 460 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 MTFMTQ96DP5 389 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms