RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 CAPN6Q9Y6Q1 641 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 PDE2AO00408 941 aaPredicted RBP19.86■□□□□ 0.77
CAPN3-209ENST00000466222 KRT5P13647 590 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 ACTN2P35609 894 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 RBP5P82980 135 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 NAB2Q15742 525 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 C9orf57Q5W0N0 161 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 LEKR1Q6ZMV7 388 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 NT5DC4Q86YG4 428 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 GOLGA6L1Q8N7Z2 621 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 OLIG1Q8TAK6 271 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 SLC20A1Q8WUM9 679 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 NOX5Q96PH1 765 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 PAAF1Q9BRP4 392 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 SDCBP2Q9H190 292 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 RSAD1Q9HA92 442 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 UBQLN1Q9UMX0 589 aaKnown RBP19.86■□□□□ 0.77
CAPN3-209ENST00000466222 GIT1Q9Y2X7 761 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 SPTLC1O15269 473 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 TNNT3P45378 269 aaPredicted RBP19.86■□□□□ 0.77
CAPN3-209ENST00000466222 RAB27AP51159 221 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 ZSCAN26Q16670 478 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 ZNF394Q53GI3 561 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 OSBPL9Q96SU4 736 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.86■□□□□ 0.77
CAPN3-209ENST00000466222 NIF3L1Q9GZT8 377 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 SMYD3Q9H7B4 428 aa19.86■□□□□ 0.77
CAPN3-209ENST00000466222 A0A087X0T9 212 aa19.85■□□□□ 0.77
CAPN3-209ENST00000466222 MOCS3O95396 460 aa19.85■□□□□ 0.77
CAPN3-209ENST00000466222 IVLP07476 585 aa19.85■□□□□ 0.77
CAPN3-209ENST00000466222 FAM228BP0C875 321 aa19.85■□□□□ 0.77
CAPN3-209ENST00000466222 FERP16591 822 aa19.85■□□□□ 0.77
CAPN3-209ENST00000466222 PRKCIP41743 596 aa19.85■□□□□ 0.77
CAPN3-209ENST00000466222 PAFAH1B1P43034 410 aa19.85■□□□□ 0.77
CAPN3-209ENST00000466222 UBE2Q1Q7Z7E8 422 aa19.85■□□□□ 0.77
CAPN3-209ENST00000466222 ZNF185O15231 689 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 FAM189BP81408 668 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 ORC1Q13415 861 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 GLE1Q53GS7 698 aaKnown RBP19.84■□□□□ 0.77
CAPN3-209ENST00000466222 TMEM270Q6UE05 265 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 PALB2Q86YC2 1186 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 HACE1Q8IYU2 909 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 SEPT8Q92599 483 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 RPS6KC1Q96S38 1066 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 PCDHB4Q9Y5E5 795 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.84■□□□□ 0.77
CAPN3-209ENST00000466222 CXCL10P02778 98 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 THP07101 528 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 TNFRSF8P28908 595 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 SSTR3P32745 418 aaPredicted RBP19.84■□□□□ 0.77
CAPN3-209ENST00000466222 GATMP50440 423 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 C2orf54Q08AI8 447 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 ZNF667Q5HYK9 610 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 CLLU1OSQ5K130 101 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 CCDC181Q5TID7 509 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 NOP9Q86U38 636 aaKnown RBP19.84■□□□□ 0.77
CAPN3-209ENST00000466222 GLYCTKQ8IVS8 523 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 SYT11Q9BT88 431 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 FTHL17Q9BXU8 183 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 CISHQ9NSE2 258 aa19.84■□□□□ 0.77
CAPN3-209ENST00000466222 CASTOR2A6NHX0 329 aa19.83■□□□□ 0.77
CAPN3-209ENST00000466222 PIRO00625 290 aa19.83■□□□□ 0.77
CAPN3-209ENST00000466222 CLCNKBP51801 687 aa19.83■□□□□ 0.77
CAPN3-209ENST00000466222 GYS2P54840 703 aa19.83■□□□□ 0.77
CAPN3-209ENST00000466222 ENOSF1Q7L5Y1 443 aa19.83■□□□□ 0.77
CAPN3-209ENST00000466222 UBR7Q8N806 425 aa19.83■□□□□ 0.77
CAPN3-209ENST00000466222 SPATA4Q8NEY3 305 aa19.83■□□□□ 0.77
CAPN3-209ENST00000466222 EPS8L1Q8TE68 723 aa19.83■□□□□ 0.77
CAPN3-209ENST00000466222 AENQ8WTP8 325 aaKnown RBP19.83■□□□□ 0.77
CAPN3-209ENST00000466222 PGBD4Q96DM1 585 aa19.83■□□□□ 0.77
CAPN3-209ENST00000466222 RNF216Q9NWF9 866 aaPredicted RBP19.83■□□□□ 0.77
CAPN3-209ENST00000466222 HMGXB4Q9UGU5 601 aa19.83■□□□□ 0.77
CAPN3-209ENST00000466222 DAAM1Q9Y4D1 1078 aa19.83■□□□□ 0.77
CAPN3-209ENST00000466222 SNX9Q9Y5X1 595 aa19.83■□□□□ 0.77
CAPN3-209ENST00000466222 DDX3XO00571 662 aaKnown RBP eCLIP19.82■□□□□ 0.76
CAPN3-209ENST00000466222 B4GALT3O60512 393 aa19.82■□□□□ 0.76
CAPN3-209ENST00000466222 CSF2RAP15509 400 aa19.82■□□□□ 0.76
CAPN3-209ENST00000466222 TBXAS1P24557 533 aaPredicted RBP19.82■□□□□ 0.76
CAPN3-209ENST00000466222 ATICP31939 592 aa19.82■□□□□ 0.76
CAPN3-209ENST00000466222 LNX1Q8TBB1 728 aaPredicted RBP19.82■□□□□ 0.76
CAPN3-209ENST00000466222 SELENOOQ9BVL4 669 aa19.82■□□□□ 0.76
CAPN3-209ENST00000466222 F8W810 466 aa19.82■□□□□ 0.76
CAPN3-209ENST00000466222 RNF40O75150 1001 aa19.82■□□□□ 0.76
CAPN3-209ENST00000466222 SYF2O95926 243 aaKnown RBP19.82■□□□□ 0.76
CAPN3-209ENST00000466222 CYP11B1P15538 503 aa19.82■□□□□ 0.76
CAPN3-209ENST00000466222 CAPN2P17655 700 aa19.82■□□□□ 0.76
CAPN3-209ENST00000466222 C10orf76Q5T2E6 689 aa19.82■□□□□ 0.76
CAPN3-209ENST00000466222 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.82■□□□□ 0.76
CAPN3-209ENST00000466222 C3orf58Q8NDZ4 430 aa19.82■□□□□ 0.76
CAPN3-209ENST00000466222 TAF4BQ92750 862 aa19.82■□□□□ 0.76
CAPN3-209ENST00000466222 BCO2Q9BYV7 579 aa19.82■□□□□ 0.76
CAPN3-209ENST00000466222 VRTNQ9H8Y1 702 aa19.82■□□□□ 0.76
CAPN3-209ENST00000466222 NOCTQ9UK39 431 aaKnown RBP19.82■□□□□ 0.76
CAPN3-209ENST00000466222 MMEP08473 750 aa19.81■□□□□ 0.76
CAPN3-209ENST00000466222 CFHP08603 1231 aa19.81■□□□□ 0.76
CAPN3-209ENST00000466222 SKIP12755 728 aa19.81■□□□□ 0.76
CAPN3-209ENST00000466222 CHRNB2P17787 502 aa19.81■□□□□ 0.76
CAPN3-209ENST00000466222 PAN2Q504Q3 1202 aaKnown RBP19.81■□□□□ 0.76
CAPN3-209ENST00000466222 ZNF280BQ86YH2 543 aa19.81■□□□□ 0.76
CAPN3-209ENST00000466222 RBBP8NLQ8NC74 664 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms