RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 CD302Q8IX05 232 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 WDTC1Q8N5D0 677 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 C7orf31Q8N865 590 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 C1orf131Q8NDD1 294 aaKnown RBP19.4■□□□□ 0.7
COL9A3-205ENST00000466192 HHIPL1Q96JK4 782 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 ZMAT2Q96NC0 199 aaKnown RBP19.4■□□□□ 0.7
COL9A3-205ENST00000466192 PCDHGC3Q9UN70 934 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 CCDC66A2RUB6 948 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 LSM8O95777 96 aaKnown RBP19.4■□□□□ 0.7
COL9A3-205ENST00000466192 ORC1Q13415 861 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 NNTQ13423 1086 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 SEL1L2Q5TEA6 688 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 PPP1R2P3Q6NXS1 205 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 WHAMMQ8TF30 809 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 TWNKQ96RR1 684 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 HMGXB4Q9UGU5 601 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 HTTP42858 3142 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 MYO1FO00160 1098 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 RNF40O75150 1001 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 GJA9P57773 515 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 CAP1Q01518 475 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 CLUL1Q15846 466 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 GNASQ5JWF2 1037 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 APBB1IPQ7Z5R6 666 aaPredicted RBP19.39■□□□□ 0.69
COL9A3-205ENST00000466192 SNX27Q96L92 541 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 NXF3Q9H4D5 531 aaKnown RBP19.39■□□□□ 0.69
COL9A3-205ENST00000466192 PLEKHA5Q9HAU0 1116 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 GPBP1L1Q9HC44 474 aaPredicted RBP19.39■□□□□ 0.69
COL9A3-205ENST00000466192 CASP8AP2Q9UKL3 1982 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 KIF3CO14782 793 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 CD19P15391 556 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 CDH5P33151 784 aaPredicted RBP19.39■□□□□ 0.69
COL9A3-205ENST00000466192 RBP5P82980 135 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 TRIM32Q13049 653 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 CUL1Q13616 776 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 MFSD14CQ5VZR4 134 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 SLC4A11Q8NBS3 891 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 TMEM35BQ8NCS4 154 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 SMC1BQ8NDV3 1235 aa19.39■□□□□ 0.69
COL9A3-205ENST00000466192 MRPL47Q9HD33 250 aaKnown RBP19.39■□□□□ 0.69
COL9A3-205ENST00000466192 PIN4Q9Y237 131 aaKnown RBP19.39■□□□□ 0.69
COL9A3-205ENST00000466192 CILPO75339 1184 aa19.38■□□□□ 0.69
COL9A3-205ENST00000466192 GJB6O95452 261 aa19.38■□□□□ 0.69
COL9A3-205ENST00000466192 PGK1P00558 417 aa19.38■□□□□ 0.69
COL9A3-205ENST00000466192 GNAT1P11488 350 aa19.38■□□□□ 0.69
COL9A3-205ENST00000466192 ECHS1P30084 290 aa19.38■□□□□ 0.69
COL9A3-205ENST00000466192 PRKCZQ05513 592 aa19.38■□□□□ 0.69
COL9A3-205ENST00000466192 TRIM51Q9BSJ1 452 aa19.38■□□□□ 0.69
COL9A3-205ENST00000466192 ZNF518BQ9C0D4 1074 aa19.38■□□□□ 0.69
COL9A3-205ENST00000466192 ELOVL4Q9GZR5 314 aa19.38■□□□□ 0.69
COL9A3-205ENST00000466192 CYP3A43Q9HB55 503 aa19.38■□□□□ 0.69
COL9A3-205ENST00000466192 UTP11Q9Y3A2 253 aaKnown RBP19.38■□□□□ 0.69
COL9A3-205ENST00000466192 DAPK3O43293 454 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 STAU1O95793 577 aaKnown RBP19.37■□□□□ 0.69
COL9A3-205ENST00000466192 PAEPP09466 180 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 AXLP30530 894 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 CRYBB1P53674 252 aaPredicted RBP19.37■□□□□ 0.69
COL9A3-205ENST00000466192 RWDD2BP57060 319 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 DAB2IPQ5VWQ8 1189 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 DENND1BQ6P3S1 775 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 CXCL17Q6UXB2 119 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 TRIM6Q9C030 488 aaPredicted RBP19.37■□□□□ 0.69
COL9A3-205ENST00000466192 PARVAQ9NVD7 372 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 DERAQ9Y315 318 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 SCINQ9Y6U3 715 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 BRCA2P51587 3418 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 BHMG1C9JSJ3 638 aaPredicted RBP19.37■□□□□ 0.69
COL9A3-205ENST00000466192 HSF2BPO75031 334 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 RECQL4O94761 1208 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 PROSCO94903 275 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 P4HA1P13674 534 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 DR1Q01658 176 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 LLGL1Q15334 1064 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 ZBTB6Q15916 424 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 PPP2R5EQ16537 467 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 ALKAL1Q6UXT8 129 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 ZDHHC14Q8IZN3 488 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 NME8Q8N427 588 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 MTG1Q9BT17 334 aaPredicted RBP19.37■□□□□ 0.69
COL9A3-205ENST00000466192 TRIM31Q9BZY9 425 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 RNF19AQ9NV58 838 aa19.37■□□□□ 0.69
COL9A3-205ENST00000466192 TCRBV5S1A1TA0A578 114 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 TCRBV7S2A1N4TA0A589 114 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 PPEF2O14830 753 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 TLR3O15455 904 aaKnown RBP19.36■□□□□ 0.69
COL9A3-205ENST00000466192 KPNA6O60684 536 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 ALDH1A1P00352 501 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 CALB1P05937 261 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 AKAP5P24588 427 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 SLC1A1P43005 524 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 YARSP54577 528 aaKnown RBP19.36■□□□□ 0.69
COL9A3-205ENST00000466192 GLRA4Q5JXX5 417 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 PRELID2Q8N945 189 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 C18orf8Q96DM3 657 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 APOL6Q9BWW8 343 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 UPF3AQ9H1J1 476 aaKnown RBP19.36■□□□□ 0.69
COL9A3-205ENST00000466192 NEUROG2Q9H2A3 272 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 DPH5Q9H2P9 285 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 TUBGCP4Q9UGJ1 667 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 AOC2O75106 756 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms