RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 FAM200AQ8TCP9 573 aa18.77■□□□□ 0.6
HMGN1-209ENST00000463631 GTSE1Q9NYZ3 720 aa18.77■□□□□ 0.6
HMGN1-209ENST00000463631 ODF2LQ9ULJ1 636 aa18.77■□□□□ 0.6
HMGN1-209ENST00000463631 ANK1P16157 1881 aa18.77■□□□□ 0.6
HMGN1-209ENST00000463631 LACTBL1A8MY62 500 aa18.76■□□□□ 0.59
HMGN1-209ENST00000463631 DPYSL4O14531 572 aa18.76■□□□□ 0.59
HMGN1-209ENST00000463631 OGTO15294 1046 aa18.76■□□□□ 0.59
HMGN1-209ENST00000463631 PRAMEF12O95522 483 aa18.76■□□□□ 0.59
HMGN1-209ENST00000463631 MATR3P43243 847 aaKnown RBP eCLIP18.76■□□□□ 0.59
HMGN1-209ENST00000463631 LILRA4P59901 499 aa18.76■□□□□ 0.59
HMGN1-209ENST00000463631 ARHGAP15Q53QZ3 475 aa18.76■□□□□ 0.59
HMGN1-209ENST00000463631 BICD1Q96G01 975 aa18.76■□□□□ 0.59
HMGN1-209ENST00000463631 ATXN3LQ9H3M9 355 aa18.76■□□□□ 0.59
HMGN1-209ENST00000463631 ZMYM5Q9UJ78 669 aa18.76■□□□□ 0.59
HMGN1-209ENST00000463631 SLC27A5Q9Y2P5 690 aa18.76■□□□□ 0.59
HMGN1-209ENST00000463631 PPEF2O14830 753 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 CYP11A1P05108 521 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 PLA2G4BP0C869 781 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 GABRR2P28476 465 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 LIG4P49917 911 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 GUCY2FP51841 1108 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 SRSF5Q13243 272 aaKnown RBP18.75■□□□□ 0.59
HMGN1-209ENST00000463631 TMEM119Q4V9L6 283 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 RILPL1Q5EBL4 403 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 GPR158Q5T848 1215 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 ARMCX5Q6P1M9 558 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 WDR5BQ86VZ2 330 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 CD302Q8IX05 232 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 FAM160A2Q8N612 972 aaPredicted RBP18.75■□□□□ 0.59
HMGN1-209ENST00000463631 OR10T2Q8NGX3 314 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 BPIFB1Q8TDL5 484 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 DDX1Q92499 740 aaKnown RBP18.75■□□□□ 0.59
HMGN1-209ENST00000463631 ZFYVE19Q96K21 471 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 SENP8Q96LD8 212 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 TASP1Q9H6P5 420 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 C2orf42Q9NWW7 574 aa18.75■□□□□ 0.59
HMGN1-209ENST00000463631 DENND4CQ5VZ89 1909 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 A0A0B4J269 797 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 CCDC163A0A0D9SF12 145 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 SLC26A4O43511 780 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 SEC24BO95487 1268 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 ATF6P18850 670 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 CDC25CP30307 473 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 TUFMP49411 452 aaKnown RBP18.74■□□□□ 0.59
HMGN1-209ENST00000463631 MCM2P49736 904 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 ZNF131P52739 623 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 LIMK1P53667 647 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 CACNB1Q02641 598 aaPredicted RBP18.74■□□□□ 0.59
HMGN1-209ENST00000463631 VEPH1Q14D04 833 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 PON2Q15165 354 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 ZRSR1Q15695 479 aaKnown RBP18.74■□□□□ 0.59
HMGN1-209ENST00000463631 ARSHQ5FYA8 562 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 LOXL4Q96JB6 756 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 TMEM209Q96SK2 561 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 RPF1Q9H9Y2 349 aaKnown RBP18.74■□□□□ 0.59
HMGN1-209ENST00000463631 IL21Q9HBE4 155 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 CPSF3Q9UKF6 684 aaKnown RBP18.74■□□□□ 0.59
HMGN1-209ENST00000463631 TBX20Q9UMR3 447 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 DERAQ9Y315 318 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 SCN1AP35498 2009 aa18.74■□□□□ 0.59
HMGN1-209ENST00000463631 SDK1Q7Z5N4 2213 aa18.73■□□□□ 0.59
HMGN1-209ENST00000463631 ANO9A1A5B4 782 aa18.73■□□□□ 0.59
HMGN1-209ENST00000463631 PIRO00625 290 aa18.73■□□□□ 0.59
HMGN1-209ENST00000463631 SOAT2O75908 522 aa18.73■□□□□ 0.59
HMGN1-209ENST00000463631 ITPRIPL2Q3MIP1 535 aa18.73■□□□□ 0.59
HMGN1-209ENST00000463631 C9orf57Q5W0N0 161 aa18.73■□□□□ 0.59
HMGN1-209ENST00000463631 ARL6IP4Q66PJ3 421 aaKnown RBP18.73■□□□□ 0.59
HMGN1-209ENST00000463631 HEATR6Q6AI08 1181 aaKnown RBP18.73■□□□□ 0.59
HMGN1-209ENST00000463631 C2orf15Q8WU43 125 aaKnown RBP18.73■□□□□ 0.59
HMGN1-209ENST00000463631 CDK5RAP3Q96JB5 506 aa18.73■□□□□ 0.59
HMGN1-209ENST00000463631 REEP2Q9BRK0 252 aa18.73■□□□□ 0.59
HMGN1-209ENST00000463631 ZCWPW1Q9H0M4 648 aa18.73■□□□□ 0.59
HMGN1-209ENST00000463631 DSEQ9UL01 958 aa18.73■□□□□ 0.59
HMGN1-209ENST00000463631 OBSL1O75147 1896 aa18.73■□□□□ 0.59
HMGN1-209ENST00000463631 ZFHX4Q86UP3 3567 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 NPHP3-ACAD11A0A0J9YXS1 232 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 GDF9O60383 454 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 TNK2Q07912 1038 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 SMARCB1Q12824 385 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 JADE1Q6IE81 842 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 SLC39A4Q6P5W5 647 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 CEP68Q76N32 757 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 GAB3Q8WWW8 586 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 GCNAQ96QF7 691 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 SEPT5Q99719 369 aaPredicted RBP18.72■□□□□ 0.59
HMGN1-209ENST00000463631 FAM83CQ9BQN1 747 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 MSTO1Q9BUK6 570 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 CCSER1Q9C0I3 900 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 THG1LQ9NWX6 298 aaKnown RBP18.72■□□□□ 0.59
HMGN1-209ENST00000463631 C2CD2Q9Y426 696 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 CFAP47Q6ZTR5 3102 aa18.72■□□□□ 0.59
HMGN1-209ENST00000463631 VWA3AA6NCI4 1184 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 K7ENM7 598 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 NFICP08651 508 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 ABCD1P33897 745 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 CYP4F8P98187 520 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 TMEM132DQ14C87 1099 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 PTPAQ15257 358 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 ST3GAL2Q16842 350 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 SLC39A12Q504Y0 691 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms