RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 ZRSR1Q15695 479 aaKnown RBP17.04■□□□□ 0.32
SND1-203ENST00000463020 ARSHQ5FYA8 562 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 DGKKQ5KSL6 1271 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 TRIM68Q6AZZ1 485 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 OVOS1Q6IE37 1185 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 TCEAL6Q6IPX3 200 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 FSTL4Q6MZW2 842 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 DSTYKQ6XUX3 929 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 CEP68Q76N32 757 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 TMEM150AQ86TG1 271 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 TCEAL3Q969E4 200 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 E2F7Q96AV8 911 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 SLC46A2Q9BY10 475 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 GPR88Q9GZN0 384 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 FBRSL1Q9HCM7 1045 aaKnown RBP17.04■□□□□ 0.32
SND1-203ENST00000463020 HPS4Q9NQG7 708 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 AKAP13Q12802 2813 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 EML5Q05BV3 1969 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 OR6C75A6NL08 312 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 CLDN3O15551 220 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 NFICP08651 508 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 CLTAP09496 248 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 U2AF2P26368 475 aaKnown RBP eCLIP17.03■□□□□ 0.321e-8■□□□□ 9
SND1-203ENST00000463020 CNR2P34972 360 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 ALDH1A3P47895 512 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 TRAPPC10P48553 1259 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 SLC12A3P55017 1021 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 STRN3Q13033 797 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 SLC39A4Q6P5W5 647 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 ZPBP2Q6X784 338 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 MSANTD3Q96H12 275 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 CHAMP1Q96JM3 812 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 SENP8Q96LD8 212 aa17.03■□□□□ 0.32
SND1-203ENST00000463020 GREB1Q4ZG55 1949 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 NMT1P30419 496 aaKnown RBP17.02■□□□□ 0.32
SND1-203ENST00000463020 HOXA6P31267 233 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 MATR3P43243 847 aaKnown RBP eCLIP17.02■□□□□ 0.32
SND1-203ENST00000463020 RAP1GAPP47736 663 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 LILRA4P59901 499 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 PLD1Q13393 1074 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 AASDHQ4L235 1098 aaPredicted RBP17.02■□□□□ 0.32
SND1-203ENST00000463020 SLC39A12Q504Y0 691 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 ARHGAP29Q52LW3 1261 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 KRT79Q5XKE5 535 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 JADE1Q6IE81 842 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 USP37Q86T82 979 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 LRRTM3Q86VH5 581 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 BPIFB1Q8TDL5 484 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 GIPC2Q8TF65 315 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 EZH1Q92800 747 aaPredicted RBP17.02■□□□□ 0.32
SND1-203ENST00000463020 SEPT5Q99719 369 aaPredicted RBP17.02■□□□□ 0.32
SND1-203ENST00000463020 IKZF4Q9H2S9 585 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 C17orf75Q9HAS0 396 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 PLEKHA5Q9HAU0 1116 aa17.02■□□□□ 0.32
SND1-203ENST00000463020 UBQLN1Q9UMX0 589 aaKnown RBP17.02■□□□□ 0.32
SND1-203ENST00000463020 CACNA1GO43497 2377 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 TISP43B9A030 160 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 DPYSL4O14531 572 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 EPN2O95208 641 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 EGFP01133 1207 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 ADRB2P07550 413 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 ARSAP15289 507 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 TYMPP19971 482 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 CYP3A5P20815 502 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 GPR15P49685 360 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 NCKAP1LP55160 1127 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 PPP2R3AQ06190 1150 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 MYBPC2Q14324 1141 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 HYIQ5T013 277 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 SPATA1Q5VX52 437 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 SCARA3Q6AZY7 606 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 SYT2Q8N9I0 419 aaPredicted RBP17.01■□□□□ 0.31
SND1-203ENST00000463020 GAB3Q8WWW8 586 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 FAM83CQ9BQN1 747 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 TASP1Q9H6P5 420 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.01■□□□□ 0.31
SND1-203ENST00000463020 NOL7Q9UMY1 257 aaKnown RBP17.01■□□□□ 0.31
SND1-203ENST00000463020 LIMCH1Q9UPQ0 1083 aa17.01■□□□□ 0.31
SND1-203ENST00000463020 ANTXRLA6NF34 631 aa17■□□□□ 0.31
SND1-203ENST00000463020 DCLK1O15075 740 aa17■□□□□ 0.31
SND1-203ENST00000463020 RPP40O75818 363 aaKnown RBP17■□□□□ 0.31
SND1-203ENST00000463020 LIMK1P53667 647 aa17■□□□□ 0.31
SND1-203ENST00000463020 GNL2Q13823 731 aaKnown RBP17■□□□□ 0.31
SND1-203ENST00000463020 ITPRIPL2Q3MIP1 535 aa17■□□□□ 0.31
SND1-203ENST00000463020 TMEM196Q5HYL7 178 aa17■□□□□ 0.31
SND1-203ENST00000463020 PLA2G2CQ5R387 149 aa17■□□□□ 0.31
SND1-203ENST00000463020 STPG1Q5TH74 334 aa17■□□□□ 0.31
SND1-203ENST00000463020 C9orf57Q5W0N0 161 aa17■□□□□ 0.31
SND1-203ENST00000463020 FAM200AQ8TCP9 573 aa17■□□□□ 0.31
SND1-203ENST00000463020 BICD1Q96G01 975 aa17■□□□□ 0.31
SND1-203ENST00000463020 LLPHQ9BRT6 129 aaKnown RBP17■□□□□ 0.31
SND1-203ENST00000463020 ZCWPW1Q9H0M4 648 aa17■□□□□ 0.31
SND1-203ENST00000463020 EBF3Q9H4W6 596 aa17■□□□□ 0.31
SND1-203ENST00000463020 GKN1Q9NS71 199 aa17■□□□□ 0.31
SND1-203ENST00000463020 TMLHEQ9NVH6 421 aa17■□□□□ 0.31
SND1-203ENST00000463020 OBP2AQ9NY56 170 aa17■□□□□ 0.31
SND1-203ENST00000463020 ASB3Q9Y575 518 aa17■□□□□ 0.31
SND1-203ENST00000463020 IGF2RP11717 2491 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 SCN1AP35498 2009 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 PIRO00625 290 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms