RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 GCNAQ96QF7 691 aa12.69□□□□□ -0.38
PCCB-203ENST00000462542 TSPAN18Q96SJ8 248 aa12.69□□□□□ -0.38
PCCB-203ENST00000462542 ADAM33Q9BZ11 813 aa12.69□□□□□ -0.38
PCCB-203ENST00000462542 CRISPLD1Q9H336 500 aa12.69□□□□□ -0.38
PCCB-203ENST00000462542 KMT5AQ9NQR1 393 aa12.69□□□□□ -0.38
PCCB-203ENST00000462542 ARHGAP28Q9P2N2 729 aa12.69□□□□□ -0.38
PCCB-203ENST00000462542 NBEAQ8NFP9 2946 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 NUP210Q8TEM1 1887 aaPredicted RBP12.68□□□□□ -0.38
PCCB-203ENST00000462542 SRRM3A6NNA2 597 aaPredicted RBP12.68□□□□□ -0.38
PCCB-203ENST00000462542 ABLIM1O14639 778 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 GIPC1O14908 333 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 KHNYNO15037 678 aaKnown RBP12.68□□□□□ -0.38
PCCB-203ENST00000462542 TOM1L1O75674 476 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 OR4Q2P0C623 313 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 HOXB3P14651 431 aaPredicted RBP12.68□□□□□ -0.38
PCCB-203ENST00000462542 TYMPP19971 482 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 CCT6AP40227 531 aaKnown RBP12.68□□□□□ -0.38
PCCB-203ENST00000462542 AARSP49588 968 aaKnown RBP eCLIP12.68□□□□□ -0.38
PCCB-203ENST00000462542 PDIA5Q14554 519 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 VEPH1Q14D04 833 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 ZBTB6Q15916 424 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 OVOS1Q6IE37 1185 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 SYT13Q7L8C5 426 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 TAS1R3Q7RTX0 852 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 CMTM8Q8IZV2 173 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 ATAD1Q8NBU5 361 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 CCDC26Q8TAB7 109 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 DRC1Q96MC2 740 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 SLC46A2Q9BY10 475 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 TMEM9BQ9NQ34 198 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 KIAA1024Q9UPX6 916 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 TIMM13Q9Y5L4 95 aaPredicted RBP12.68□□□□□ -0.38
PCCB-203ENST00000462542 DSPP15924 2871 aaKnown RBP12.68□□□□□ -0.38
PCCB-203ENST00000462542 DMXL2Q8TDJ6 3036 aa12.68□□□□□ -0.38
PCCB-203ENST00000462542 WDFY3Q8IZQ1 3526 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 MTMR11A4FU01 709 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 CLDN3O15551 220 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 MEFVO15553 781 aaPredicted RBP12.67□□□□□ -0.38
PCCB-203ENST00000462542 XPOTO43592 962 aaKnown RBP12.67□□□□□ -0.38
PCCB-203ENST00000462542 RNF40O75150 1001 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 PRAMEF12O95522 483 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 APBB3O95704 486 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 CLTAP09496 248 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 OR52Z1P0C646 297 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 GALK1P51570 392 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 STRN3Q13033 797 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 NOLC1Q14978 699 aaKnown RBP eCLIP12.67□□□□□ -0.38
PCCB-203ENST00000462542 SAFBQ15424 915 aaKnown RBP eCLIP12.67□□□□□ -0.38
PCCB-203ENST00000462542 TAF12Q16514 161 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 KYAT1Q16773 422 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 TCEAL6Q6IPX3 200 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 GATA6Q92908 595 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 TCEAL3Q969E4 200 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 P2RY13Q9BPV8 354 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 SCNM1Q9BWG6 230 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 TMEM121BQ9BXQ6 578 aaPredicted RBP12.67□□□□□ -0.38
PCCB-203ENST00000462542 TUBGCP4Q9UGJ1 667 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 UBQLN1Q9UMX0 589 aaKnown RBP12.67□□□□□ -0.38
PCCB-203ENST00000462542 DNM3Q9UQ16 869 aa12.67□□□□□ -0.38
PCCB-203ENST00000462542 FASNP49327 2511 aaKnown RBP12.66□□□□□ -0.38
PCCB-203ENST00000462542 KIF26AQ9ULI4 1882 aaPredicted RBP12.66□□□□□ -0.38
PCCB-203ENST00000462542 LNP1A1A4G5 178 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 HIP1RO75146 1068 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 EGFP01133 1207 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 DDX6P26196 483 aaKnown RBP eCLIP12.66□□□□□ -0.38
PCCB-203ENST00000462542 AVPR1AP37288 418 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 FXR2P51116 673 aaKnown RBP eCLIP12.66□□□□□ -0.38
PCCB-203ENST00000462542 SMTNP53814 917 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 SMARCB1Q12824 385 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 ECM1Q16610 540 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 USP39Q53GS9 565 aaKnown RBP12.66□□□□□ -0.38
PCCB-203ENST00000462542 CC2D1AQ6P1N0 951 aaPredicted RBP12.66□□□□□ -0.38
PCCB-203ENST00000462542 ZPBP2Q6X784 338 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 C2orf15Q8WU43 125 aaKnown RBP12.66□□□□□ -0.38
PCCB-203ENST00000462542 ACDQ96AP0 544 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 KIF12Q96FN5 646 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 ZBTB45Q96K62 511 aaPredicted RBP12.66□□□□□ -0.38
PCCB-203ENST00000462542 TIPINQ9BVW5 301 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 EBF3Q9H4W6 596 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 KIF9Q9HAQ2 790 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 IL21Q9HBE4 155 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 HPS4Q9NQG7 708 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 DDX19AQ9NUU7 478 aaKnown RBP12.66□□□□□ -0.38
PCCB-203ENST00000462542 TDP1Q9NUW8 608 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 LRWD1Q9UFC0 647 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 EML5Q05BV3 1969 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 ZFYVE26Q68DK2 2539 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 AKAP13Q12802 2813 aa12.66□□□□□ -0.38
PCCB-203ENST00000462542 ATG2BQ96BY7 2078 aa12.65□□□□□ -0.38
PCCB-203ENST00000462542 TTC26A0AVF1 554 aa12.65□□□□□ -0.38
PCCB-203ENST00000462542 DCLK1O15075 740 aa12.65□□□□□ -0.38
PCCB-203ENST00000462542 DTNBO60941 627 aa12.65□□□□□ -0.38
PCCB-203ENST00000462542 LARGE1O95461 756 aa12.65□□□□□ -0.38
PCCB-203ENST00000462542 ODC1P11926 461 aa12.65□□□□□ -0.38
PCCB-203ENST00000462542 HARSP12081 509 aaKnown RBP12.65□□□□□ -0.38
PCCB-203ENST00000462542 GBP1P32455 592 aa12.65□□□□□ -0.38
PCCB-203ENST00000462542 LILRA4P59901 499 aa12.65□□□□□ -0.38
PCCB-203ENST00000462542 CYP4F8P98187 520 aa12.65□□□□□ -0.38
PCCB-203ENST00000462542 MCL1Q07820 350 aa12.65□□□□□ -0.38
PCCB-203ENST00000462542 BFSP1Q12934 665 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms