RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 NAP1L3Q99457 506 aaPredicted RBP7.23□□□□□ -1.25
MSH2-204ENST00000461394 WNT8AQ9H1J5 351 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 NXF3Q9H4D5 531 aaKnown RBP7.23□□□□□ -1.25
MSH2-204ENST00000461394 ANKZF1Q9H8Y5 726 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 PLEKHA5Q9HAU0 1116 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 CYP3A43Q9HB55 503 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 MRPL47Q9HD33 250 aaKnown RBP7.23□□□□□ -1.25
MSH2-204ENST00000461394 ARFGAP3Q9NP61 516 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 RNF19AQ9NV58 838 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 SRRDQ9UH36 339 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 GTF2IRD1Q9UHL9 959 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 SIX4Q9UIU6 781 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 COG5Q9UP83 839 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 DERAQ9Y315 318 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 NOC2LQ9Y3T9 749 aaKnown RBP7.23□□□□□ -1.25
MSH2-204ENST00000461394 HES2Q9Y543 173 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 ALG6Q9Y672 507 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 SCINQ9Y6U3 715 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 GOLGA6L10A0A0M3HER8 536 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 GOLGA8SH3BPF8 625 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 M0QYV0 167 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 MYO1FO00160 1098 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 KRIT1O00522 736 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 CES2O00748 559 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 SEC31AO94979 1220 aaKnown RBP7.22□□□□□ -1.25
MSH2-204ENST00000461394 LSM8O95777 96 aaKnown RBP7.22□□□□□ -1.25
MSH2-204ENST00000461394 CD4P01730 458 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 CYP1A1P04798 512 aaPredicted RBP7.22□□□□□ -1.25
MSH2-204ENST00000461394 CFHP08603 1231 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 UNGP13051 313 aaPredicted RBP7.22□□□□□ -1.25
MSH2-204ENST00000461394 ITGA4P13612 1032 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 H2AFXP16104 143 aaPredicted RBP7.22□□□□□ -1.25
MSH2-204ENST00000461394 RRM1P23921 792 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 HOXA11P31270 313 aaPredicted RBP7.22□□□□□ -1.25
MSH2-204ENST00000461394 ZNF132P52740 706 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 HADHBP55084 474 aaKnown RBP7.22□□□□□ -1.25
MSH2-204ENST00000461394 NOMO3P69849 1222 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 ADAM17P78536 824 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 CENPCQ03188 943 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 ZNF211Q13398 564 aaPredicted RBP7.22□□□□□ -1.25
MSH2-204ENST00000461394 CLUL1Q15846 466 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 C2CD6Q53TS8 623 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 SGO2Q562F6 1265 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 DENND1BQ6P3S1 775 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 DNAJC24Q6P3W2 148 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 DCUN1D2Q6PH85 259 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 SLFN11Q7Z7L1 901 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 FAM228AQ86W67 206 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 TTC39CQ8N584 583 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 UBR7Q8N806 425 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 RNF169Q8NCN4 708 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 TMEM40Q8WWA1 233 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 C18orf25Q96B23 403 aaPredicted RBP7.22□□□□□ -1.25
MSH2-204ENST00000461394 TMEM176AQ96HP8 235 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 HES6Q96HZ4 224 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 PNKPQ96T60 521 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 KRT12Q99456 494 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 ZSWIM1Q9BR11 485 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.22□□□□□ -1.25
MSH2-204ENST00000461394 PLVAPQ9BX97 442 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 AP1M1Q9BXS5 423 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 BCO2Q9BYV7 579 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 PPP1R12CQ9BZL4 782 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 SDCBP2Q9H190 292 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 XYLT2Q9H1B5 865 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 SNX25Q9H3E2 840 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 PLEKHA4Q9H4M7 779 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 AVENQ9NQS1 362 aaPredicted RBP7.22□□□□□ -1.25
MSH2-204ENST00000461394 RBM12Q9NTZ6 932 aaKnown RBP7.22□□□□□ -1.25
MSH2-204ENST00000461394 TUBGCP4Q9UGJ1 667 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 DDX20Q9UHI6 824 aaKnown RBP7.22□□□□□ -1.25
MSH2-204ENST00000461394 UBQLN1Q9UMX0 589 aaKnown RBP7.22□□□□□ -1.25
MSH2-204ENST00000461394 CNTN6Q9UQ52 1028 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 STXBP5LQ9Y2K9 1186 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 SNX9Q9Y5X1 595 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 SCN10AQ9Y5Y9 1956 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 FRMPD3Q5JV73 1810 aa7.22□□□□□ -1.25
MSH2-204ENST00000461394 THSD7BQ9C0I4 1608 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 TARSL2A2RTX5 802 aaKnown RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 CCDC66A2RUB6 948 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 CCDC151A5D8V7 595 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 GPR182O15218 404 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 DDX3YO15523 660 aaKnown RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 MEFVO15553 781 aaPredicted RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 LILRB3O75022 631 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 FKTNO75072 461 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 ADAMTS4O75173 837 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 CABYRO75952 493 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 MTA2O94776 668 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 FGGP02679 453 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 RPLP2P05387 115 aaKnown RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 PAEPP09466 180 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 VDRP11473 427 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 NDST1P52848 882 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 VSNL1P62760 191 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 MRPS25P82663 173 aaKnown RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 SLC7A5Q01650 507 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 ITIH3Q06033 890 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 PTPN11Q06124 597 aaPredicted RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 PAK2Q13177 524 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms