RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 KIZQ2M2Z5 673 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 SHROOM1Q2M3G4 852 aaPredicted RBP9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 IYDQ6PHW0 289 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 RASGRP2Q7LDG7 609 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 RIN2Q8WYP3 895 aaPredicted RBP9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 MAP3K14Q99558 947 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 MTO1Q9Y2Z2 717 aaKnown RBP9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 ICE1Q9Y2F5 2266 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 USP17L15C9J2P7 530 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 USP17L13C9JLJ4 530 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 USP17L11C9JVI0 530 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 USP17L18D6R9N7 530 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 USP17L22D6RA61 530 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 USP17L17D6RBQ6 530 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 USP17L19D6RCP7 530 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 USP17L20D6RJB6 530 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 SLC16A4O15374 487 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 SOAT2O75908 522 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 LCP1P13796 627 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 USP17L24Q0WX57 530 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 GSTA3Q16772 222 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 CYP4Z2PQ8N1L4 340 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 DPP10Q8N608 796 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 PRDM5Q9NQX1 630 aaPredicted RBP9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 RESTQ13127 1097 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 PTRHD1Q6GMV3 140 aaKnown RBP9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 SGMS1Q86VZ5 419 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 NLRP14Q86W24 1093 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 DPP7Q9UHL4 492 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 DCTN4Q9UJW0 460 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 SNX24Q9Y343 169 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 EIF3HO15372 352 aaKnown RBP eCLIP9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 PRLRP16471 622 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 GUCY1A2P33402 732 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 SOAT1P35610 550 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 CLK1P49759 484 aaKnown RBP9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 KRT17Q04695 432 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 SHCBP1Q8NEM2 672 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 OR6J1Q8NGC5 347 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 ERAP1Q9NZ08 941 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 GABBR1Q9UBS5 961 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 PCDHA10Q9Y5I2 948 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 A0A1W2PQJ5 194 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 RNF103O00237 685 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 SYNCRIPO60506 623 aaKnown RBP9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 ALDH1A3P47895 512 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 PLD1Q13393 1074 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 BFSP2Q13515 415 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 HEMGNQ9BXL5 484 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 SLC13A1Q9BZW2 595 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 RANBP17Q9H2T7 1088 aaKnown RBP9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 COPS7BQ9H9Q2 264 aaPredicted RBP9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 CYP4F11Q9HBI6 524 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 KRT84Q9NSB2 600 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 SAMSN1Q9NSI8 373 aaKnown RBP9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 EIF3LQ9Y262 564 aaKnown RBP9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 USP6P35125 1406 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 IGSF1Q8N6C5 1336 aa9.27□□□□□ -0.93
SHROOM4-203ENST00000460112 TRIM13O60858 407 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 DYNLL1P63167 89 aaKnown RBP9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 SKP1P63208 163 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 NFIAQ12857 509 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 TMEM132BQ14DG7 1078 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 ARHGAP17Q68EM7 881 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 MMGT1Q8N4V1 131 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 PIGOQ8TEQ8 1089 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 LPAR1Q92633 364 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 PHACTR1Q9C0D0 580 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 SIK2Q9H0K1 926 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 TRABDQ9H4I3 376 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 IMPAD1Q9NX62 359 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 MROH2AA6NES4 1674 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 CARNS1A5YM72 827 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 RAD23BP54727 409 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 SREBF2Q12772 1141 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 ADCK5Q3MIX3 580 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 WDR93Q6P2C0 686 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 SUGP1Q8IWZ8 645 aaKnown RBP9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 NUP93Q8N1F7 819 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 CINPQ9BW66 212 aaPredicted RBP9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 CPT1AP50416 773 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 TRAPPC11Q7Z392 1133 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 ZNF677Q86XU0 584 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 C18orf8Q96DM3 657 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 PIN4Q9Y237 131 aaKnown RBP9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 MROH7-TTC4A0A0A0MT08 1334 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 USP42Q9H9J4 1324 aaKnown RBP9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 DRAP1Q14919 205 aaPredicted RBP9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 SGSM1Q2NKQ1 1148 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 P3H2Q8IVL5 708 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 FAM167BQ9BTA0 163 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 CTNNAL1Q9UBT7 734 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 RWDD3Q9Y3V2 267 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 SAC3D1A6NKF1 404 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 HOXA2O43364 376 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 SNUPNO95149 360 aaKnown RBP9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 ALDH18A1P54886 795 aaKnown RBP9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 NUP107P57740 925 aa9.26□□□□□ -0.93
SHROOM4-203ENST00000460112 PLEKHF1Q96S99 279 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms