RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 FAM124BQ9H5Z6 455 aaPredicted RBP18.32■□□□□ 0.52
PMPCB-206ENST00000456433 APOBEC3GQ9HC16 384 aaKnown RBP18.32■□□□□ 0.52
PMPCB-206ENST00000456433 FBXL5Q9UKA1 691 aa18.32■□□□□ 0.52
PMPCB-206ENST00000456433 PLXNA3P51805 1871 aa18.32■□□□□ 0.52
PMPCB-206ENST00000456433 LRRC10BA6NIK2 292 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 CA8P35219 290 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 ASPAP45381 313 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 CLCN4P51793 760 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 KRT31Q15323 416 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 VWA3BQ502W6 1294 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 HSP90AA4PQ58FG1 418 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 CREBRFQ8IUR6 639 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 SLC22A17Q8WUG5 538 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 RTP3Q9BQQ7 232 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 PI4K2AQ9BTU6 479 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 NIF3L1Q9GZT8 377 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 NDST4Q9H3R1 872 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 CBX8Q9HC52 389 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 LIMA1Q9UHB6 759 aaKnown RBP18.31■□□□□ 0.52
PMPCB-206ENST00000456433 CDY1Q9Y6F8 540 aa18.31■□□□□ 0.52
PMPCB-206ENST00000456433 BECN2A8MW95 431 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 PER2O15055 1255 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 ADAM12O43184 909 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 LRRN2O75325 713 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 RPL17P18621 184 aaKnown RBP18.3■□□□□ 0.52
PMPCB-206ENST00000456433 KLRC2P26717 231 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 WDR44Q5JSH3 913 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 SPOPLQ6IQ16 392 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 LILRA6Q6PI73 481 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 RBM23Q86U06 439 aaKnown RBP18.3■□□□□ 0.52
PMPCB-206ENST00000456433 OSTM1Q86WC4 334 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 THEM5Q8N1Q8 247 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 MICALL1Q8N3F8 863 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 ANKRD20A12PQ8NF67 263 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 MAFAQ8NHW3 353 aaPredicted RBP18.3■□□□□ 0.52
PMPCB-206ENST00000456433 HDAC7Q8WUI4 952 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 PABPC5Q96DU9 382 aaKnown RBP18.3■□□□□ 0.52
PMPCB-206ENST00000456433 MMS19Q96T76 1030 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 ACBD6Q9BR61 282 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 TSPY26PQ9H489 355 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 CYP3A43Q9HB55 503 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 NXF1Q9UBU9 619 aaKnown RBP18.3■□□□□ 0.52
PMPCB-206ENST00000456433 MAFFQ9ULX9 164 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 POLIQ9UNA4 740 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 HCFC2Q9Y5Z7 792 aa18.3■□□□□ 0.52
PMPCB-206ENST00000456433 ABLIM3O94929 683 aa18.29■□□□□ 0.52
PMPCB-206ENST00000456433 GLUD1P00367 558 aa18.29■□□□□ 0.52
PMPCB-206ENST00000456433 OR1D2P34982 312 aa18.29■□□□□ 0.52
PMPCB-206ENST00000456433 GTF2F1P35269 517 aaKnown RBP eCLIP18.29■□□□□ 0.52
PMPCB-206ENST00000456433 ROR1Q01973 937 aa18.29■□□□□ 0.52
PMPCB-206ENST00000456433 ADAM15Q13444 863 aa18.29■□□□□ 0.52
PMPCB-206ENST00000456433 TPGS2Q68CL5 300 aa18.29■□□□□ 0.52
PMPCB-206ENST00000456433 APTXQ7Z2E3 356 aaKnown RBP18.29■□□□□ 0.52
PMPCB-206ENST00000456433 EHBP1Q8NDI1 1231 aa18.29■□□□□ 0.52
PMPCB-206ENST00000456433 OR10T2Q8NGX3 314 aa18.29■□□□□ 0.52
PMPCB-206ENST00000456433 MRPL45Q9BRJ2 306 aaKnown RBP18.29■□□□□ 0.52
PMPCB-206ENST00000456433 ZCWPW1Q9H0M4 648 aa18.29■□□□□ 0.52
PMPCB-206ENST00000456433 SMYD3Q9H7B4 428 aa18.29■□□□□ 0.52
PMPCB-206ENST00000456433 DDX43Q9NXZ2 648 aaKnown RBP18.29■□□□□ 0.52
PMPCB-206ENST00000456433 GLP2RO95838 553 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 PCSK1P29120 753 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 INCA1Q0VD86 236 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 SMARCB1Q12824 385 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 GPR17Q13304 367 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 GBP6Q6ZN66 633 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 RTL10Q7L3V2 364 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 TTC39CQ8N584 583 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 VN1R2Q8NFZ6 395 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 ZNF461Q8TAF7 563 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 CASP10Q92851 521 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 NT5C1BQ96P26 610 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 SDCBP2Q9H190 292 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 TAB2Q9NYJ8 693 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 GCNT4Q9P109 453 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 DPP7Q9UHL4 492 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 FBXW11Q9UKB1 542 aa18.28■□□□□ 0.52
PMPCB-206ENST00000456433 WDR27A2RRH5 827 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 TGM5O43548 720 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 PAPLNO95428 1278 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 TPM2P07951 284 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 SRGAP2BP0DMP2 458 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 ATP1A3P13637 1013 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 CDK11BP21127 795 aaKnown RBP18.27■□□□□ 0.52
PMPCB-206ENST00000456433 TBXAS1P24557 533 aaPredicted RBP18.27■□□□□ 0.52
PMPCB-206ENST00000456433 COPB1P53618 953 aaKnown RBP18.27■□□□□ 0.52
PMPCB-206ENST00000456433 TSPY1Q01534 308 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 EXOC3L4Q17RC7 722 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 INTS6LQ5JSJ4 861 aaKnown RBP18.27■□□□□ 0.52
PMPCB-206ENST00000456433 SMYD5Q6GMV2 418 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 SCARA5Q6ZMJ2 495 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 LUZP1Q86V48 1076 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 UNC93AQ86WB7 457 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 TATDN2Q93075 761 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 ELMO3Q96BJ8 720 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 PKMYT1Q99640 499 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 INTS2Q9H0H0 1204 aaKnown RBP18.27■□□□□ 0.52
PMPCB-206ENST00000456433 PLEKHA4Q9H4M7 779 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 IGFLR1Q9H665 355 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 DZANK1Q9NVP4 752 aa18.27■□□□□ 0.52
PMPCB-206ENST00000456433 AFF4Q9UHB7 1163 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms