RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 HERC6Q8IVU3 1022 aa17.78■□□□□ 0.44
LINC00963-208ENST00000454968 CRYBG2Q8N1P7 616 aa17.78■□□□□ 0.44
LINC00963-208ENST00000454968 SLC4A11Q8NBS3 891 aa17.78■□□□□ 0.44
LINC00963-208ENST00000454968 RABGGTAQ92696 567 aa17.78■□□□□ 0.44
LINC00963-208ENST00000454968 MMS19Q96T76 1030 aa17.78■□□□□ 0.44
LINC00963-208ENST00000454968 ELOVL4Q9GZR5 314 aa17.78■□□□□ 0.44
LINC00963-208ENST00000454968 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.78■□□□□ 0.44
LINC00963-208ENST00000454968 HMGXB4Q9UGU5 601 aa17.78■□□□□ 0.44
LINC00963-208ENST00000454968 ADAM28Q9UKQ2 775 aa17.78■□□□□ 0.44
LINC00963-208ENST00000454968 STXBP5LQ9Y2K9 1186 aa17.78■□□□□ 0.44
LINC00963-208ENST00000454968 NLRC5Q86WI3 1866 aa17.78■□□□□ 0.44
LINC00963-208ENST00000454968 GBF1Q92538 1859 aa17.78■□□□□ 0.44
LINC00963-208ENST00000454968 ARHGEF37A1IGU5 675 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 NRDCO43847 1150 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 KRT5P13647 590 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 CHRNB2P17787 502 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 CD58P19256 250 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 MAGEA10P43363 369 aaPredicted RBP17.77■□□□□ 0.44
LINC00963-208ENST00000454968 BRCC3P46736 316 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 OR1G1P47890 313 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 RGS19P49795 217 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 NDST1P52848 882 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 BMS1Q14692 1282 aaKnown RBP17.77■□□□□ 0.44
LINC00963-208ENST00000454968 ADGRF2Q8IZF7 708 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 CLP1Q92989 425 aaKnown RBP17.77■□□□□ 0.44
LINC00963-208ENST00000454968 ZSWIM1Q9BR11 485 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 COLEC11Q9BWP8 271 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 MTIF3Q9H2K0 278 aaKnown RBP17.77■□□□□ 0.44
LINC00963-208ENST00000454968 ACP6Q9NPH0 428 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 KCND1Q9NSA2 647 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 DSEQ9UL01 958 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 KIAA1257Q9ULG3 409 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 PCDHB8Q9UN66 801 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 FAN1Q9Y2M0 1017 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 INSL6Q9Y581 213 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 SLC4A7Q9Y6M7 1214 aa17.77■□□□□ 0.44
LINC00963-208ENST00000454968 PTPRDP23468 1912 aa17.77■□□□□ 0.43
LINC00963-208ENST00000454968 ZBBXA8MT70 800 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 EIF3CLB5ME19 914 aaKnown RBP17.76■□□□□ 0.43
LINC00963-208ENST00000454968 SYN3O14994 580 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 ODC1P11926 461 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 EIF4A3P38919 411 aaKnown RBP17.76■□□□□ 0.43
LINC00963-208ENST00000454968 CDR2Q01850 454 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 ARID5AQ03989 594 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 MTF1Q14872 753 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 SLC18A3Q16572 532 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 PAN2Q504Q3 1202 aaKnown RBP17.76■□□□□ 0.43
LINC00963-208ENST00000454968 WSCD1Q658N2 575 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 OSTM1Q86WC4 334 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 TMEM173Q86WV6 379 aaPredicted RBP17.76■□□□□ 0.43
LINC00963-208ENST00000454968 TMEM176AQ96HP8 235 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 EIF3CQ99613 913 aaKnown RBP17.76■□□□□ 0.43
LINC00963-208ENST00000454968 RAD9AQ99638 391 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 GDF15Q99988 308 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 NT5C1AQ9BXI3 368 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 ZKSCAN5Q9Y2L8 839 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 MRPL42Q9Y6G3 142 aaKnown RBP17.76■□□□□ 0.43
LINC00963-208ENST00000454968 EPN1Q9Y6I3 576 aaPredicted RBP17.76■□□□□ 0.43
LINC00963-208ENST00000454968 CHD9Q3L8U1 2897 aa17.76■□□□□ 0.43
LINC00963-208ENST00000454968 ATP8B3O60423 1300 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 DDX3XO00571 662 aaKnown RBP eCLIP17.75■□□□□ 0.436e-11■■■■■ 35.1
LINC00963-208ENST00000454968 ZNF263O14978 683 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 TRAPPC3O43617 180 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 OAZ2O95190 189 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 NDUFA10O95299 355 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 LAG3P18627 525 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 LHX1P48742 406 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 PDE6CP51160 858 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 FMO1Q01740 532 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 MRPL58Q14197 206 aaKnown RBP17.75■□□□□ 0.43
LINC00963-208ENST00000454968 BTG3Q14201 252 aaPredicted RBP17.75■□□□□ 0.43
LINC00963-208ENST00000454968 DSTYKQ6XUX3 929 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 SLC39A11Q8N1S5 342 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 LNX1Q8TBB1 728 aaPredicted RBP17.75■□□□□ 0.43
LINC00963-208ENST00000454968 BCL7CQ8WUZ0 217 aaPredicted RBP17.75■□□□□ 0.43
LINC00963-208ENST00000454968 ZNF606Q8WXB4 792 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 TRIM44Q96DX7 344 aaPredicted RBP17.75■□□□□ 0.43
LINC00963-208ENST00000454968 CCDC42Q96M95 316 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 YME1L1Q96TA2 773 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 AGPAT1Q99943 283 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 RTP3Q9BQQ7 232 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 PCDHGC3Q9UN70 934 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 PRG3Q9Y2Y8 225 aaPredicted RBP17.75■□□□□ 0.43
LINC00963-208ENST00000454968 PDE4DIPQ5VU43 2346 aa17.75■□□□□ 0.43
LINC00963-208ENST00000454968 SF3B1O75533 1304 aaKnown RBP eCLIP17.74■□□□□ 0.438e-6■■■■■ 107
LINC00963-208ENST00000454968 A0A087X0T9 212 aa17.74■□□□□ 0.43
LINC00963-208ENST00000454968 FAM228BP0C875 321 aa17.74■□□□□ 0.43
LINC00963-208ENST00000454968 ATP2A2P16615 1042 aaKnown RBP17.74■□□□□ 0.43
LINC00963-208ENST00000454968 FGFR3P22607 806 aa17.74■□□□□ 0.43
LINC00963-208ENST00000454968 GNA15P30679 374 aa17.74■□□□□ 0.43
LINC00963-208ENST00000454968 GNL1P36915 607 aaPredicted RBP17.74■□□□□ 0.43
LINC00963-208ENST00000454968 USP8P40818 1118 aa17.74■□□□□ 0.43
LINC00963-208ENST00000454968 ALDH7A1P49419 539 aaKnown RBP17.74■□□□□ 0.43
LINC00963-208ENST00000454968 KIF11P52732 1056 aa17.74■□□□□ 0.43
LINC00963-208ENST00000454968 ELAVL2Q12926 359 aaKnown RBP17.74■□□□□ 0.43
LINC00963-208ENST00000454968 TDRD12Q587J7 1177 aaKnown RBP17.74■□□□□ 0.43
LINC00963-208ENST00000454968 C9orf50Q5SZB4 431 aa17.74■□□□□ 0.43
LINC00963-208ENST00000454968 KCNT2Q6UVM3 1135 aa17.74■□□□□ 0.43
LINC00963-208ENST00000454968 SLC20A1Q8WUM9 679 aa17.74■□□□□ 0.43
LINC00963-208ENST00000454968 TFAP2BQ92481 460 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms