RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 CPSF3Q9UKF6 684 aaKnown RBP11.81□□□□□ -0.52
USP1-204ENST00000452143 DSEQ9UL01 958 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 RAB23Q9ULC3 237 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 DERAQ9Y315 318 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 CACNA1BQ00975 2339 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 KMT2BQ9UMN6 2715 aaPredicted RBP11.8□□□□□ -0.52
USP1-204ENST00000452143 LRP3O75074 770 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 TBCAO75347 108 aaKnown RBP11.8□□□□□ -0.52
USP1-204ENST00000452143 CYP11A1P05108 521 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 CCNE1P24864 410 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 GJB2P29033 226 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 WEE1P30291 646 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 LILRA4P59901 499 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 SMARCB1Q12824 385 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 TMEM132DQ14C87 1099 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 VEPH1Q14D04 833 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 ARHGAP29Q52LW3 1261 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 ARHGAP15Q53QZ3 475 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 C9orf57Q5W0N0 161 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 LAIR1Q6GTX8 287 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 JADE1Q6IE81 842 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 RALGPS2Q86X27 583 aaPredicted RBP11.8□□□□□ -0.52
USP1-204ENST00000452143 SPEM1Q8N4L4 309 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 MYCT1Q8N699 235 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 CELF5Q8N6W0 485 aaKnown RBP11.8□□□□□ -0.52
USP1-204ENST00000452143 TMX3Q96JJ7 454 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 SENP8Q96LD8 212 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 MKNK1Q9BUB5 465 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 TMEM121BQ9BXQ6 578 aaPredicted RBP11.8□□□□□ -0.52
USP1-204ENST00000452143 ST6GALNAC4Q9H4F1 302 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 ASB7Q9H672 318 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 LMAN1LQ9HAT1 526 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 ZMYM5Q9UJ78 669 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 CDV3Q9UKY7 258 aaKnown RBP11.8□□□□□ -0.52
USP1-204ENST00000452143 C2CD2Q9Y426 696 aa11.8□□□□□ -0.52
USP1-204ENST00000452143 SPAG17Q6Q759 2223 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 RALGAPA1Q6GYQ0 2036 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 ANO9A1A5B4 782 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 MYBPHLA2RUH7 354 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 SLC38A8A6NNN8 435 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 PIRO00625 290 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 PPEF2O14830 753 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 KRT18P05783 430 aaKnown RBP11.79□□□□□ -0.52
USP1-204ENST00000452143 NFICP08651 508 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 PLCG1P19174 1290 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 CDC25CP30307 473 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 CNR2P34972 360 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 LONP1P36776 959 aaKnown RBP11.79□□□□□ -0.52
USP1-204ENST00000452143 CXCL12P48061 93 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 TUFMP49411 452 aaKnown RBP11.79□□□□□ -0.52
USP1-204ENST00000452143 GUCY2FP51841 1108 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 GTF2BQ00403 316 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 PLCB2Q00722 1185 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 POU5F1Q01860 360 aaKnown RBP11.79□□□□□ -0.52
USP1-204ENST00000452143 DGKKQ5KSL6 1271 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 STXBP5Q5T5C0 1151 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 SLC39A4Q6P5W5 647 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 GAREM2Q75VX8 874 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 DNAJB7Q7Z6W7 309 aaPredicted RBP11.79□□□□□ -0.52
USP1-204ENST00000452143 ARID3BQ8IVW6 561 aaPredicted RBP11.79□□□□□ -0.52
USP1-204ENST00000452143 TMEM130Q8N3G9 435 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 ATAD1Q8NBU5 361 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 OR10T2Q8NGX3 314 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 RASSF8Q8NHQ8 419 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 C2orf15Q8WU43 125 aaKnown RBP11.79□□□□□ -0.52
USP1-204ENST00000452143 RSPRY1Q96DX4 576 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 GCNAQ96QF7 691 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 FIZ1Q96SL8 496 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 CCSER1Q9C0I3 900 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 BLOC1S4Q9NUP1 217 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 USP18Q9UMW8 372 aa11.79□□□□□ -0.52
USP1-204ENST00000452143 ZNF638Q14966 1978 aaKnown RBP11.79□□□□□ -0.52
USP1-204ENST00000452143 SPECC1L-ADORA2AF8WAN1 911 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 DPYSL4O14531 572 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 TGM1P22735 817 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 GABRR2P28476 465 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 CTHP32929 405 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 MCM2P49736 904 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 TAF6P49848 677 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 KPNA1P52294 538 aaPredicted RBP11.78□□□□□ -0.52
USP1-204ENST00000452143 SATB1Q01826 763 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 SLFN12LQ6IEE8 588 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 BRAPQ7Z569 592 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 NT5DC4Q86YG4 428 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 SYNPOQ8N3V7 929 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 TTC9BQ8N6N2 239 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 FAM200AQ8TCP9 573 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 SPPL2BQ8TCT7 592 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 LRRC15Q8TF66 581 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 LARP4BQ92615 738 aaKnown RBP11.78□□□□□ -0.52
USP1-204ENST00000452143 RAD54LQ92698 747 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 HVCN1Q96D96 273 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 SEPT5Q99719 369 aaPredicted RBP11.78□□□□□ -0.52
USP1-204ENST00000452143 RTKNQ9BST9 563 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 ZCWPW1Q9H0M4 648 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 ATXN3LQ9H3M9 355 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 SLC27A5Q9Y2P5 690 aa11.78□□□□□ -0.52
USP1-204ENST00000452143 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.78□□□□□ -0.52
USP1-204ENST00000452143 PCDHB13Q9Y5F0 798 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms