RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TFAMQ00059 246 aaKnown RBP13.46□□□□□ -0.25
CPSF4-208ENST00000452047 AMPD3Q01432 767 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 PFKPQ01813 784 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 DNM1Q05193 864 aaKnown RBP13.46□□□□□ -0.25
CPSF4-208ENST00000452047 SNW1Q13573 536 aaKnown RBP13.46□□□□□ -0.25
CPSF4-208ENST00000452047 MLF2Q15773 248 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-208ENST00000452047 SV2CQ496J9 727 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 RESP18Q5W5W9 173 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 WSCD1Q658N2 575 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 SCARA3Q6AZY7 606 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 STXBP4Q6ZWJ1 553 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 GPD1LQ8N335 351 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 PJA1Q8NG27 643 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 SHKBP1Q8TBC3 707 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 C7orf25Q9BPX7 421 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 FOXQ1Q9C009 403 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 PCIF1Q9H4Z3 704 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 MAGEF1Q9HAY2 307 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 PDE11AQ9HCR9 933 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 SLC27A5Q9Y2P5 690 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 TICRRQ7Z2Z1 1910 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 NCANO14594 1321 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 PTPRJQ12913 1337 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 DENND4CQ5VZ89 1909 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 SOAT2O75908 522 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 DCNP07585 359 aaKnown RBP13.45□□□□□ -0.26
CPSF4-208ENST00000452047 MYL4P12829 197 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 GLULP15104 373 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 CASP1P29466 404 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 PNPLA4P41247 253 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 NBL1P41271 181 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 ALDH1A3P47895 512 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 ME1P48163 572 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 EPHB3P54753 998 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 PRKCQQ04759 706 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 ANGPT1Q15389 498 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 TEAD2Q15562 447 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 SLC39A12Q504Y0 691 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 SLC44A4Q53GD3 710 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 FAM26FQ5R3K3 315 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 UNC13DQ70J99 1090 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 LRRTM3Q86VH5 581 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 METTL23Q86XA0 190 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 LRRC52Q8N7C0 313 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 SPRYD3Q8NCJ5 442 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 ZNF507Q8TCN5 953 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 SMARCD2Q92925 531 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 PSMG2Q969U7 264 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 SHDQ96IW2 340 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 MTMR12Q9C0I1 747 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 TRPV4Q9HBA0 871 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 ZFP14Q9HCL3 533 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 SIX4Q9UIU6 781 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 RCOR1Q9UKL0 485 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 ITGA11Q9UKX5 1188 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 AGAP1Q9UPQ3 857 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 SIT1Q9Y3P8 196 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 ASB3Q9Y575 518 aa13.45□□□□□ -0.26
CPSF4-208ENST00000452047 OBSL1O75147 1896 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 UBE4BO95155 1302 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 A0A1W2PRU2 124 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 KANSL1LA0AUZ9 987 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 SHISA7A6NL88 538 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 TGFB1I1O43294 461 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 ATF6P18850 670 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 VITQ6UXI7 678 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 GAREM2Q75VX8 874 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 DNAJB7Q7Z6W7 309 aaPredicted RBP13.44□□□□□ -0.26
CPSF4-208ENST00000452047 CBWD2Q8IUF1 395 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 PDCL2Q8N4E4 241 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 ZSCAN18Q8TBC5 510 aaPredicted RBP13.44□□□□□ -0.26
CPSF4-208ENST00000452047 NOC3LQ8WTT2 800 aaKnown RBP13.44□□□□□ -0.26
CPSF4-208ENST00000452047 CACTINQ8WUQ7 758 aaKnown RBP13.44□□□□□ -0.26
CPSF4-208ENST00000452047 SCFD1Q8WVM8 642 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 MKNK1Q9BUB5 465 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 ZNF334Q9HCZ1 680 aaPredicted RBP13.44□□□□□ -0.26
CPSF4-208ENST00000452047 INTS13Q9NVM9 706 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 GDAP2Q9NXN4 497 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 HSPBP1Q9NZL4 362 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 CFAP45Q9UL16 551 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 L1RE1Q9UN81 338 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 FANCMQ8IYD8 2048 aa13.44□□□□□ -0.26
CPSF4-208ENST00000452047 ZNF292O60281 2723 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 CACNA1IQ9P0X4 2223 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 LRRN2O75325 713 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 CDR1P51861 262 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 SMARCB1Q12824 385 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 GRM2Q14416 872 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 BMT2Q1RMZ1 405 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 STXBP5Q5T5C0 1151 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 LMBRD2Q68DH5 695 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-208ENST00000452047 THEM5Q8N1Q8 247 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 CSGALNACT2Q8N6G5 542 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 OR5B17Q8NGF7 314 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 SPPL2BQ8TCT7 592 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 C2orf15Q8WU43 125 aaKnown RBP13.43□□□□□ -0.26
CPSF4-208ENST00000452047 DNASE1L2Q92874 299 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 SEPT5Q99719 369 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-208ENST00000452047 LPIN3Q9BQK8 851 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 GPR88Q9GZN0 384 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms