RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 ANKRD63C9JTQ0 380 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 K7ENM7 598 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 HNRNPDLO14979 420 aaKnown RBP11.03□□□□□ -0.64
LINC01004-202ENST00000450686 NCAM2O15394 837 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 CLTAP09496 248 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 CHRNB1P11230 501 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 NMT1P30419 496 aaKnown RBP11.03□□□□□ -0.64
LINC01004-202ENST00000450686 PRPHP41219 470 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 LIG4P49917 911 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 EPHA5P54756 1037 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 NCKAP1LP55160 1127 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 PPP2R3AQ06190 1150 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 TNK2Q07912 1038 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 MCM6Q14566 821 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 C8orf34Q49A92 452 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 HYIQ5T013 277 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 SCARA3Q6AZY7 606 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 OVOS1Q6IE37 1185 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 CENPPQ6IPU0 288 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 ZPBP2Q6X784 338 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 GAREM2Q75VX8 874 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 HAUS6Q7Z4H7 955 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 MFSD6LQ8IWD5 586 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 BEST2Q8NFU1 509 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 IRF7Q92985 503 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 CDK5RAP3Q96JB5 506 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 SENP8Q96LD8 212 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 CNTNAP3BQ96NU0 1288 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 NELL2Q99435 816 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 SEPT5Q99719 369 aaPredicted RBP11.03□□□□□ -0.64
LINC01004-202ENST00000450686 NTPCRQ9BSD7 190 aaKnown RBP11.03□□□□□ -0.64
LINC01004-202ENST00000450686 MSTO1Q9BUK6 570 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 CNTNAP3Q9BZ76 1288 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 GTSE1Q9NYZ3 720 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 MRPS17Q9Y2R5 130 aaKnown RBP11.03□□□□□ -0.64
LINC01004-202ENST00000450686 CEP295Q9C0D2 2601 aa11.03□□□□□ -0.64
LINC01004-202ENST00000450686 OBSL1O75147 1896 aa11.02□□□□□ -0.64
LINC01004-202ENST00000450686 USP24Q9UPU5 2620 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 MAN2B1O00754 1011 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 ARHGAP33O14559 1287 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 OAZ2O95190 189 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 ATF6P18850 670 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 GABRR2P28476 465 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 GJB2P29033 226 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 LRPAP1P30533 357 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 MAGEA9P43362 315 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 PXNP49023 591 aaPredicted RBP11.02□□□□□ -0.65
LINC01004-202ENST00000450686 AARSP49588 968 aaKnown RBP eCLIP11.02□□□□□ -0.651e-8■■□□□ 12.2
LINC01004-202ENST00000450686 ACOT2P49753 483 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 KPNA1P52294 538 aaPredicted RBP11.02□□□□□ -0.65
LINC01004-202ENST00000450686 SMTNP53814 917 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 EPHB3P54753 998 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 PLD1Q13393 1074 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 KARSQ15046 597 aaKnown RBP11.02□□□□□ -0.65
LINC01004-202ENST00000450686 PON2Q15165 354 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 CCDC6Q16204 474 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 CCDC142Q17RM4 750 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 SLC39A12Q504Y0 691 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 ZC2HC1CQ53FD0 456 aaPredicted RBP11.02□□□□□ -0.65
LINC01004-202ENST00000450686 GPR158Q5T848 1215 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 PKN3Q6P5Z2 889 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 USP37Q86T82 979 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 ARID3BQ8IVW6 561 aaPredicted RBP11.02□□□□□ -0.65
LINC01004-202ENST00000450686 YAF2Q8IY57 180 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 MYCT1Q8N699 235 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 ZSWIM2Q8NEG5 633 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 CSGALNACT1Q8TDX6 532 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 GIPC2Q8TF65 315 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 DEPDC1BQ8WUY9 529 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 ATXN3LQ9H3M9 355 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 RPF1Q9H9Y2 349 aaKnown RBP11.02□□□□□ -0.65
LINC01004-202ENST00000450686 BLOC1S4Q9NUP1 217 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 TBX20Q9UMR3 447 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 UBQLN1Q9UMX0 589 aaKnown RBP11.02□□□□□ -0.65
LINC01004-202ENST00000450686 ZFHX4Q86UP3 3567 aa11.02□□□□□ -0.65
LINC01004-202ENST00000450686 DENND4CQ5VZ89 1909 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 SPECC1L-ADORA2AF8WAN1 911 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 LAD1O00515 517 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 OGTO15294 1046 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 HRO43593 1189 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 GDF9O60383 454 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 KRT37O76014 449 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 MICAL2O94851 1124 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 FAM13AO94988 1023 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 PLCG1P19174 1290 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 MLLT3P42568 568 aaPredicted RBP11.01□□□□□ -0.65
LINC01004-202ENST00000450686 ALDH1A3P47895 512 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 GPR15P49685 360 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 WNT7BP56706 349 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 LILRA4P59901 499 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 GPR17Q13304 367 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 SDHAF4Q5VUM1 108 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 C9orf57Q5W0N0 161 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 NAIF1Q69YI7 327 aaPredicted RBP11.01□□□□□ -0.65
LINC01004-202ENST00000450686 DNAJB7Q7Z6W7 309 aaPredicted RBP11.01□□□□□ -0.65
LINC01004-202ENST00000450686 FAM200AQ8TCP9 573 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 TIPINQ9BVW5 301 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 C17orf75Q9HAS0 396 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 TRPV4Q9HBA0 871 aa11.01□□□□□ -0.65
LINC01004-202ENST00000450686 GMEB2Q9UKD1 530 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms