RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 CGNQ9P2M7 1197 aaKnown RBP16.71■□□□□ 0.27
LIMS1-210ENST00000449684 TCHHQ07283 1943 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 SCN1AP35498 2009 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 MUC6Q6W4X9 2439 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 ACTN4O43707 911 aaKnown RBP16.7■□□□□ 0.26
LIMS1-210ENST00000449684 DLATP10515 647 aaKnown RBP16.7■□□□□ 0.26
LIMS1-210ENST00000449684 CEBPBP17676 345 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 HOXD13P35453 343 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 TUFMP49411 452 aaKnown RBP16.7■□□□□ 0.26
LIMS1-210ENST00000449684 CLCN5P51795 746 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 PTPN5P54829 565 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 TSPY1Q01534 308 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 SMARCB1Q12824 385 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 PSMD2Q13200 908 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 VEPH1Q14D04 833 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 SNRNP35Q16560 246 aaKnown RBP16.7■□□□□ 0.26
LIMS1-210ENST00000449684 KNOP1Q1ED39 458 aaKnown RBP16.7■□□□□ 0.26
LIMS1-210ENST00000449684 MGAT5BQ3V5L5 792 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 CENPPQ6IPU0 288 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 ITIH5Q86UX2 942 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 HS6ST3Q8IZP7 471 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 OR10T2Q8NGX3 314 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 GOLGA5Q8TBA6 731 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 GPR152Q8TDT2 470 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 TCEAL4Q96EI5 215 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 CCDC34Q96HJ3 373 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 SEPT5Q99719 369 aaPredicted RBP16.7■□□□□ 0.26
LIMS1-210ENST00000449684 KXD1Q9BQD3 176 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 RPP25Q9BUL9 199 aaKnown RBP16.7■□□□□ 0.26
LIMS1-210ENST00000449684 SLITRK6Q9H5Y7 841 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 INTS13Q9NVM9 706 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 CEP72Q9P209 647 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 SNX9Q9Y5X1 595 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 ZNF318Q5VUA4 2279 aa16.7■□□□□ 0.26
LIMS1-210ENST00000449684 GOLGA6L4A6NEF3 574 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 TGFB1I1O43294 461 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 EXOC3O60645 756 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 PRPF40AO75400 957 aaKnown RBP16.69■□□□□ 0.26
LIMS1-210ENST00000449684 MICAL2O94851 1124 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 CLSTN1O94985 981 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 MYL1P05976 194 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 CDR1P51861 262 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 GPC5P78333 572 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 MYL7Q01449 175 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 EHHADHQ08426 723 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 KMT5BQ4FZB7 885 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 WDR49Q8IV35 697 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 TMEM86AQ8N2M4 240 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 FSIP1Q8NA03 581 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 CCDC127Q96BQ5 260 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 BORCS6Q96GS4 357 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 RTP3Q9BQQ7 232 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 ZCWPW1Q9H0M4 648 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 ABI2Q9NYB9 513 aaPredicted RBP16.69■□□□□ 0.26
LIMS1-210ENST00000449684 ASB3Q9Y575 518 aa16.69■□□□□ 0.26
LIMS1-210ENST00000449684 KIF20AO95235 890 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 NDUFA8P51970 172 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 NUBP1P53384 320 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 NUCB2P80303 420 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 PFKPQ01813 784 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 BMT2Q1RMZ1 405 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 PRSS36Q5K4E3 855 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 PDCL2Q8N4E4 241 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 SPPL2BQ8TCT7 592 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 C2orf15Q8WU43 125 aaKnown RBP16.68■□□□□ 0.26
LIMS1-210ENST00000449684 HPDLQ96IR7 371 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 SHDQ96IW2 340 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 FAM84AQ96KN4 292 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 IRF2BPLQ9H1B7 796 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 CRISPLD1Q9H336 500 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 ZFP14Q9HCL3 533 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 ARHGEF3Q9NR81 526 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 SLC2A4RGQ9NR83 387 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 HSFX1Q9UBD0 423 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 HPSEQ9Y251 543 aa16.68■□□□□ 0.26
LIMS1-210ENST00000449684 A0A1W2PQ27 194 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 A0A1W2PQ64 194 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 A0A1W2PQD8 194 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 ECI2O75521 394 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 SOAT2O75908 522 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 VNN2O95498 520 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 FGF19O95750 216 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 RPN1P04843 607 aaKnown RBP16.67■□□□□ 0.26
LIMS1-210ENST00000449684 GJA1P17302 382 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 CCR2P41597 374 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 NHLH1Q02575 133 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 NFE2Q16621 373 aaPredicted RBP16.67■□□□□ 0.26
LIMS1-210ENST00000449684 DNAJB7Q7Z6W7 309 aaPredicted RBP16.67■□□□□ 0.26
LIMS1-210ENST00000449684 ADGRF2Q8IZF7 708 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 TTC9BQ8N6N2 239 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 TMEM105Q8N8V8 129 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 PRSS33Q8NF86 280 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 OR5B17Q8NGF7 314 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 GCNAQ96QF7 691 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 MMS19Q96T76 1030 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 GPR88Q9GZN0 384 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 GDPD2Q9HCC8 539 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 GDAP2Q9NXN4 497 aa16.67■□□□□ 0.26
LIMS1-210ENST00000449684 DDX43Q9NXZ2 648 aaKnown RBP16.67■□□□□ 0.26
LIMS1-210ENST00000449684 SIX4Q9UIU6 781 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms