RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 NFATC1O95644 943 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 WEE2P0C1S8 567 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 CMA1P23946 247 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 CXCL12P48061 93 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 MYL5Q02045 173 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 DNAJC24Q6P3W2 148 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 CYP2W1Q8TAV3 490 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 SNX21Q969T3 373 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 MTMR9Q96QG7 549 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 MYOCQ99972 504 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 NT5C1AQ9BXI3 368 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 FANCEQ9HB96 536 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 NLRC4Q9NPP4 1024 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 AFPP02771 609 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 SHROOM1Q2M3G4 852 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 ERICH1Q86X53 443 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 TAB3Q8N5C8 712 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 TRIM11Q96F44 468 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 ASS1P00966 412 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 IQCF3P0C7M6 154 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 SLFN14P0C7P3 912 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 PFKFB1P16118 471 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 AKT1P31749 480 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 SARSP49591 514 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 RPL6Q02878 288 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 TPGS1Q6ZTW0 290 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 MIB1Q86YT6 1006 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 MYO1AQ9UBC5 1043 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 ITGB1BP2Q9UKP3 347 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 BTAF1O14981 1849 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 SLC2A3P11169 496 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 GCLMP48507 274 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 SLC12A2P55011 1212 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 NME3Q13232 169 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 TAX1BP1Q86VP1 789 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 DHX38Q92620 1227 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 LPPQ93052 612 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 FUBP3Q96I24 572 aaKnown RBP eCLIP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 DCLK3Q9C098 648 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 DNAJC18Q9H819 358 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 TYW1Q9NV66 732 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 PVALEFA0A1B0GWK0 134 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 OR6C75A6NL08 312 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 PIK3CDO00329 1044 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 PPP6R2O75170 966 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 IL1BP01584 269 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 HDCP19113 662 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 ACO1P21399 889 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 POM121L1PQ3SYA9 428 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 TMEM270Q6UE05 265 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 EHBP1Q8NDI1 1231 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 PPP1R14CQ8TAE6 165 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 DHTKD1Q96HY7 919 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZBED3Q96IU2 234 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 GSDMAQ96QA5 445 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 CCDC3Q9BQI4 270 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 LSM14BQ9BX40 385 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 SEMA6BQ9H3T3 888 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 BCAS3Q9H6U6 928 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZMYM5Q9UJ78 669 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 CITO14578 2027 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 KPNA3O00505 521 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 NR3C1P04150 777 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 HTR1BP28222 390 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 GABRR2P28476 465 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 RESTQ13127 1097 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 SEC23AQ15436 765 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 TSGA10IPQ3SY00 556 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 USP53Q70EK8 1073 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.94□□□□□ -1.461e-7■■□□□ 12.9
CDC42BPA-209ENST00000448940 NUP58Q9BVL2 599 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 FBXO44Q9H4M3 255 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 USP29Q9HBJ7 922 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 ICE1Q9Y2F5 2266 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 TCF20Q9UGU0 1960 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 NEMP2A6NFY4 417 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 RFXAPO00287 272 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 EIF3DO15371 548 aaKnown RBP eCLIP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 DNAJC6O75061 913 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 STAMBPO95630 424 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 SDC4P31431 198 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 RPL9P32969 192 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 Q4G0T1 1027 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 MORN1Q5T089 497 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 ESRP1Q6NXG1 681 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 C16orf46Q6P387 395 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 ADGRF2Q8IZF7 708 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 CCNYQ8ND76 341 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 SUSD2Q9UGT4 822 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 PRPSAP2O60256 369 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 RTN3O95197 1032 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 ITGB3P05106 788 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 C8AP07357 584 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 NMT1P30419 496 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 COG7P83436 770 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 SMARCB1Q12824 385 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 SEL1L2Q5TEA6 688 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 KIAA0319LQ8IZA0 1049 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms