RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SH3PXD2AQ5TCZ1 1133 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 IER5Q5VY09 327 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 ZBTB8OSQ8IWT0 167 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 UBA3Q8TBC4 463 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 FEZF2Q8TBJ5 459 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 ART4Q93070 314 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 PIWIL1Q96J94 861 aaKnown RBP15.69■□□□□ 0.1
SF1-211ENST00000448404 EPN3Q9H201 632 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 LRRC19Q9H756 370 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 IFT122Q9HBG6 1241 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 HES2Q9Y543 173 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 MGAMO43451 1857 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 MAP3K6O95382 1288 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 KRT1P04264 644 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 CETPP11597 493 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 MBTD1Q05BQ5 628 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 CALCOCO2Q13137 446 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 MTMR3Q13615 1198 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 LIN9Q5TKA1 542 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 JADE1Q6IE81 842 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 PLEKHA7Q6IQ23 1121 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 CYP4F22Q6NT55 531 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 GSTA5Q7RTV2 222 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 C1orf127Q8N9H9 656 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 SCLT1Q96NL6 688 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 NIF3L1Q9GZT8 377 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 IFNB1P01574 187 aa15.68■□□□□ 0.1
SF1-211ENST00000448404 CHRM1P11229 460 aaPredicted RBP15.68■□□□□ 0.1
SF1-211ENST00000448404 IFT88Q13099 833 aa15.68■□□□□ 0.1
SF1-211ENST00000448404 FASTKD3Q14CZ7 662 aaKnown RBP15.68■□□□□ 0.1
SF1-211ENST00000448404 MICALL1Q8N3F8 863 aa15.68■□□□□ 0.1
SF1-211ENST00000448404 ADAM7Q9H2U9 754 aa15.68■□□□□ 0.1
SF1-211ENST00000448404 AVENQ9NQS1 362 aaPredicted RBP15.68■□□□□ 0.1
SF1-211ENST00000448404 DNAJC25-GNG10A0A024R161 153 aa15.68■□□□□ 0.1
SF1-211ENST00000448404 LRRD1A4D1F6 860 aa15.68■□□□□ 0.1
SF1-211ENST00000448404 CHN1P15882 459 aa15.68■□□□□ 0.1
SF1-211ENST00000448404 ZNF132P52740 706 aa15.68■□□□□ 0.1
SF1-211ENST00000448404 BPIFB4P59827 614 aa15.68■□□□□ 0.1
SF1-211ENST00000448404 KLF1Q13351 362 aaPredicted RBP15.68■□□□□ 0.1
SF1-211ENST00000448404 PRAMEF19Q5SWL8 479 aa15.68■□□□□ 0.1
SF1-211ENST00000448404 DNAJC24Q6P3W2 148 aa15.68■□□□□ 0.1
SF1-211ENST00000448404 ZPBP2Q6X784 338 aa15.68■□□□□ 0.1
SF1-211ENST00000448404 WDR49Q8IV35 697 aa15.68■□□□□ 0.1
SF1-211ENST00000448404 PODXLO00592 558 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 ADCY6O43306 1168 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 ERLIN2O94905 339 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 TGFB3P10600 412 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 IL1R2P27930 398 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 ADORA2AP29274 412 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 LACTBP83111 547 aaPredicted RBP15.67■□□□□ 0.1
SF1-211ENST00000448404 MCL1Q07820 350 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 AMHR2Q16671 573 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 GLRA4Q5JXX5 417 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 CDCA2Q69YH5 1023 aaPredicted RBP15.67■□□□□ 0.1
SF1-211ENST00000448404 MPZL3Q6UWV2 235 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 RUFY4Q6ZNE9 571 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 RHOT1Q8IXI2 618 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 CYP4X1Q8N118 509 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 ARFGAP1Q8N6T3 406 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 UBR7Q8N806 425 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 C12orf29Q8N999 325 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 CPXM1Q96SM3 734 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 PPEF2O14830 753 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 HGSO14964 777 aaPredicted RBP15.67■□□□□ 0.1
SF1-211ENST00000448404 RGS16O15492 202 aaPredicted RBP15.67■□□□□ 0.1
SF1-211ENST00000448404 STAG3L1P0CL83 205 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 EPHX2P34913 555 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 NFX1Q12986 1120 aaKnown RBP15.67■□□□□ 0.1
SF1-211ENST00000448404 PHF13Q86YI8 300 aaPredicted RBP15.67■□□□□ 0.1
SF1-211ENST00000448404 CCDC33Q8N5R6 958 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 EIF1ADQ8N9N8 165 aaKnown RBP15.67■□□□□ 0.1
SF1-211ENST00000448404 TMEM121Q9BTD3 319 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 FAM49AQ9H0Q0 323 aaPredicted RBP15.67■□□□□ 0.1
SF1-211ENST00000448404 PTPRHQ9HD43 1115 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 MTRF1LQ9UGC7 380 aaKnown RBP15.67■□□□□ 0.1
SF1-211ENST00000448404 GGT7Q9UJ14 662 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 CLEC11AQ9Y240 323 aa15.67■□□□□ 0.1
SF1-211ENST00000448404 IGKV6-21A0A0C4DH24 114 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 TMEM191CA6NGB0 347 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 C22orf31O95567 290 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 LGALS2P05162 132 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 PLCB3Q01970 1234 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 ARHGAP1Q07960 439 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 RNF187Q5TA31 235 aaPredicted RBP15.66■□□□□ 0.1
SF1-211ENST00000448404 JPH2Q9BR39 696 aaPredicted RBP15.66■□□□□ 0.1
SF1-211ENST00000448404 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.66■□□□□ 0.1
SF1-211ENST00000448404 ACKR2O00590 384 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 TBXAS1P24557 533 aaPredicted RBP15.66■□□□□ 0.1
SF1-211ENST00000448404 EFNA5P52803 228 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 KIZQ2M2Z5 673 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 P3H1Q32P28 736 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 ERICH1Q86X53 443 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 ZNF677Q86XU0 584 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.66■□□□□ 0.1
SF1-211ENST00000448404 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.66■□□□□ 0.12e-6■■■■□ 19.4
SF1-211ENST00000448404 SYT17Q9BSW7 474 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 ELOVL4Q9GZR5 314 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 PARVAQ9NVD7 372 aa15.66■□□□□ 0.1
SF1-211ENST00000448404 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.66■□□□□ 0.1
SF1-211ENST00000448404 GH1P01241 217 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms