RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 LOXL4Q96JB6 756 aa13.53□□□□□ -0.24
SSR4-205ENST00000447375 CCDC94Q9BW85 323 aaPredicted RBP13.53□□□□□ -0.24
SSR4-205ENST00000447375 HAPLN2Q9GZV7 340 aa13.53□□□□□ -0.24
SSR4-205ENST00000447375 CXCL16Q9H2A7 254 aa13.53□□□□□ -0.24
SSR4-205ENST00000447375 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
SSR4-205ENST00000447375 PIAS3Q9Y6X2 628 aa13.53□□□□□ -0.24
SSR4-205ENST00000447375 CITO14578 2027 aa13.52□□□□□ -0.24
SSR4-205ENST00000447375 NOTCH4Q99466 2003 aa13.52□□□□□ -0.24
SSR4-205ENST00000447375 WDFY3Q8IZQ1 3526 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 A0A0B4J269 797 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 GIPC1O14908 333 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 HNRNPDLO14979 420 aaKnown RBP13.52□□□□□ -0.25
SSR4-205ENST00000447375 PAPSS2O95340 614 aaPredicted RBP13.52□□□□□ -0.25
SSR4-205ENST00000447375 AFMP43652 599 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 LIG4P49917 911 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 ASIC1P78348 528 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 EHHADHQ08426 723 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 GRIK3Q13003 919 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 ALCAMQ13740 583 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 NOLC1Q14978 699 aaKnown RBP eCLIP13.52□□□□□ -0.25
SSR4-205ENST00000447375 PSMD5Q16401 504 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 SLC39A4Q6P5W5 647 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 CEP57Q86XR8 500 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 FSIP1Q8NA03 581 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 LNX1Q8TBB1 728 aaPredicted RBP13.52□□□□□ -0.25
SSR4-205ENST00000447375 ZCCHC14Q8WYQ9 949 aaKnown RBP13.52□□□□□ -0.25
SSR4-205ENST00000447375 PAGE5Q96GU1 130 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 ACAP3Q96P50 834 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 TTPALQ9BTX7 342 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 ZFP14Q9HCL3 533 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 ZNF334Q9HCZ1 680 aaPredicted RBP13.52□□□□□ -0.25
SSR4-205ENST00000447375 TRPV5Q9NQA5 729 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 CHMP5Q9NZZ3 219 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 TBC1D7Q9P0N9 293 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 ANKFY1Q9P2R3 1169 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 STYXL1Q9Y6J8 313 aa13.52□□□□□ -0.25
SSR4-205ENST00000447375 PDCD11Q14690 1871 aaKnown RBP13.51□□□□□ -0.25
SSR4-205ENST00000447375 SF3B1O75533 1304 aaKnown RBP eCLIP13.51□□□□□ -0.25
SSR4-205ENST00000447375 PVALEFA0A1B0GWK0 134 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 ANKRD63C9JTQ0 380 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 ADAM12O43184 909 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 FAM189A1O60320 539 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 EPN2O95208 641 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 GCNT3O95395 438 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 TOP3BO95985 862 aaKnown RBP13.51□□□□□ -0.25
SSR4-205ENST00000447375 THP07101 528 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 RHOP08100 348 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 CLTAP09496 248 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 CCNE1P24864 410 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 CASP1P29466 404 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 GDI1P31150 447 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 CASP5P51878 434 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 YARSP54577 528 aaKnown RBP13.51□□□□□ -0.25
SSR4-205ENST00000447375 OSTNP61366 133 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 KCNA1Q09470 495 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 ZNF252P-AS1Q0IIN9 211 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 CUL4BQ13620 913 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 LRRC32Q14392 662 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 NAB2Q15742 525 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 KYAT1Q16773 422 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 SLC5A9Q2M3M2 681 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 L1TD1Q5T7N2 865 aaKnown RBP13.51□□□□□ -0.25
SSR4-205ENST00000447375 FAM171A1Q5VUB5 890 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 UNC13DQ70J99 1090 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 CACNA2D4Q7Z3S7 1137 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 WDR5BQ86VZ2 330 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 PIK3R5Q8WYR1 880 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 KIF12Q96FN5 646 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 ACCSQ96QU6 501 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 BLZF1Q9H2G9 400 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 GOLPH3LQ9H4A5 285 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 SMOC1Q9H4F8 434 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 TOPORSQ9NS56 1045 aaPredicted RBP13.51□□□□□ -0.25
SSR4-205ENST00000447375 ZFYVE26Q68DK2 2539 aa13.51□□□□□ -0.25
SSR4-205ENST00000447375 SMIM28A0A1B0GU29 152 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 MEFVO15553 781 aaPredicted RBP13.5□□□□□ -0.25
SSR4-205ENST00000447375 ZNF202O95125 648 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 ZIC2O95409 532 aaPredicted RBP13.5□□□□□ -0.25
SSR4-205ENST00000447375 MYL1P05976 194 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 HARSP12081 509 aaKnown RBP13.5□□□□□ -0.25
SSR4-205ENST00000447375 KCNE1P15382 129 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 CEBPBP17676 345 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 FCARP24071 287 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 MATR3P43243 847 aaKnown RBP eCLIP13.5□□□□□ -0.25
SSR4-205ENST00000447375 RAP1GAPP47736 663 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 TUSC3Q13454 348 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 RAB33AQ14088 237 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 HSP90AA2PQ14568 343 aaPredicted RBP13.5□□□□□ -0.25
SSR4-205ENST00000447375 SLC10A6Q3KNW5 377 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 FAM78AQ5JUQ0 283 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 PLA2G2CQ5R387 149 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 SLFN12LQ6IEE8 588 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 RTL10Q7L3V2 364 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 EPM2AIP1Q7L775 607 aaPredicted RBP13.5□□□□□ -0.25
SSR4-205ENST00000447375 GRAMD1CQ8IYS0 662 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 HPS3Q969F9 1004 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 PPP1R10Q96QC0 940 aaKnown RBP13.5□□□□□ -0.25
SSR4-205ENST00000447375 SCNM1Q9BWG6 230 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 FGFBP2Q9BYJ0 223 aa13.5□□□□□ -0.25
SSR4-205ENST00000447375 PLEKHA5Q9HAU0 1116 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms