RNA–Protein interactions for RNA: ENST00000446636.5

CTTNBP2-208, Transcript of cortactin binding protein 2, human

TSL 5

Gene CTTNBP2, Length 4,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTTNBP2-208	ENST00000446636	CCL15-CCL14	A0A0B4J2E2	113 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	LOC102724159	A0A0B4J2E5	919 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ADM5	C9JUS6	153 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	DDX3Y	O15523	660 aa	Known RBP	10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	STRN	O43815	780 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	FARP2	O94887	1054 aa	Predicted RBP	10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	VDR	P11473	427 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	EPHX2	P34913	555 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	SPARCL1	Q14515	664 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	PWP2	Q15269	919 aa	Known RBP	10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	CCL15	Q16663	113 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	TAB3	Q8N5C8	712 aa	Predicted RBP	10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ZNF541	Q9H0D2	1346 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ARHGEF37	A1IGU5	675 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	MEFV	O15553	781 aa	Predicted RBP	10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	MT-ND3	P03897	115 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ZFX	P17010	805 aa	Predicted RBP	10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	CA4	P22748	312 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	EIF4B	P23588	611 aa	Known RBP	10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	CDH6	P55285	790 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	GRM1	Q13255	1194 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	SH3D19	Q5HYK7	790 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	C9orf131	Q5VYM1	1079 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	NUGGC	Q68CJ6	796 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	DUPD1	Q68J44	220 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	B3GNT9	Q6UX72	402 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	USP50	Q70EL3	339 aa	Predicted RBP	10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	SRRM1	Q8IYB3	904 aa	Known RBP	10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	PAF1	Q8N7H5	531 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	PCDHB18P	Q96TA0	734 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	RSAD1	Q9HA92	442 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	XPNPEP1	Q9NQW7	623 aa		10.42	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	IQANK1	A0A1B0GTG1	560 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	IRF6	O14896	467 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ITGB3	P05106	788 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	STAG3L1	P0CL83	205 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	PDGFRA	P16234	1089 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ARL2	P36404	184 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	BCAR1	P56945	870 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ROR1	Q01973	937 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ZNF844	Q08AG5	666 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	HIF1A	Q16665	826 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	PHF13	Q86YI8	300 aa	Predicted RBP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	TRIM42	Q8IWZ5	723 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	CDKL2	Q92772	493 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	FBXL18	Q96ME1	805 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	KLHL11	Q9NVR0	708 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	NUB1	Q9Y5A7	615 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636		A8MXQ7	604 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	USP2	O75604	605 aa	Predicted RBP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	CP	P00450	1065 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	PAEP	P09466	180 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	EIF3E	P60228	445 aa	Known RBP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	PDIA2	Q13087	525 aa	Known RBP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	TFDP3	Q5H9I0	405 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	KATNAL2	Q8IYT4	538 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	SIX6OS1	Q8N1H7	587 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	PRELID2	Q8N945	189 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ALG3	Q92685	438 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	FAF2	Q96CS3	445 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ELAC2	Q9BQ52	826 aa	Known RBP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	DCLK3	Q9C098	648 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ACP6	Q9NPH0	428 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	NOCT	Q9UK39	431 aa	Known RBP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	STXBP5L	Q9Y2K9	1186 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	NEU2	Q9Y3R4	380 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	CFAP69	A5D8W1	941 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	SRRM3	A6NNA2	597 aa	Predicted RBP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	PPFIA2	O75334	1257 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	CD4	P01730	458 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	INSRR	P14616	1297 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ADSS	P30520	456 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	RPL21	P46778	160 aa	Known RBP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ATP11A	P98196	1134 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	KYNU	Q16719	465 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	C2CD6	Q53TS8	623 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	NT5DC4	Q86YG4	428 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	CDCA5	Q96FF9	252 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	TNIP3	Q96KP6	325 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	LRRC19	Q9H756	370 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	USP20	Q9Y2K6	914 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	MAD1L1	Q9Y6D9	718 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	TAF1L	Q8IZX4	1826 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ZNF189	O75820	626 aa	Predicted RBP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	CHN1	P15882	459 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	MAGEA4	P43358	317 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	SF3A3	Q12874	501 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ZBED8	Q8IZ13	594 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	GABPB2	Q8TAK5	448 aa	Predicted RBP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ATG4A	Q8WYN0	398 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	FIZ1	Q96SL8	496 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	ACO2	Q99798	780 aa	Known RBP	10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	SH3GL2	Q99962	352 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	SNX9	Q9Y5X1	595 aa		10.41	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	FSCN2	O14926	492 aa		10.4	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	MYL3	P08590	195 aa		10.4	□□□□□ -0.74
CTTNBP2-208	ENST00000446636	RNASEL	Q05823	741 aa	Known RBP	10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms