RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 PURAQ00577 322 aaKnown RBP20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 BEX3Q00994 111 aa20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 HIC1Q14526 733 aa20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 CYP1B1Q16678 543 aa20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 ERICH1Q86X53 443 aa20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 CPNE8Q86YQ8 564 aa20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 MREGQ8N565 214 aa20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 FAM71BQ8TC56 605 aa20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 SMYD3Q9H7B4 428 aa20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 CDHR5Q9HBB8 845 aa20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 KIAA1257Q9ULG3 409 aa20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 GINS2Q9Y248 185 aa20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 UTP11Q9Y3A2 253 aaKnown RBP20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 TCRBV5S1A1TA0A578 114 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 ESYT3A0FGR9 886 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 TLR3O15455 904 aaKnown RBP20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 TREHO43280 583 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 CD19P15391 556 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 PTPN11Q06124 597 aaPredicted RBP20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 INCA1Q0VD86 236 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 MYO1EQ12965 1108 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 SNX17Q15036 470 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 MFSD14CQ5VZR4 134 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 ALS2CLQ60I27 953 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 DNAJC24Q6P3W2 148 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 RHOT1Q8IXI2 618 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 C7orf31Q8N865 590 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 SLC4A11Q8NBS3 891 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 TMEM176AQ96HP8 235 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 TRIM7Q9C029 511 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 SNTG2Q9NY99 539 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 RASAL2Q9UJF2 1139 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 BARX2Q9UMQ3 279 aaPredicted RBP20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 NR2E1Q9Y466 385 aa20.02■□□□□ 0.79
SEMA3D-202ENST00000444867 TMEM191CA6NGB0 347 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 H3BQF6 201 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 FSCN2O14926 492 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 TTI1O43156 1089 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 ALDH1A1P00352 501 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 CDH8P55286 799 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 GSCP56915 257 aaPredicted RBP20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 GJA9P57773 515 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 IRX5P78411 483 aaPredicted RBP20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 DR1Q01658 176 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 ZBTB6Q15916 424 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 C2CD6Q53TS8 623 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 CEP350Q5VT06 3117 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 AADACL2Q6P093 401 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 LLGL2Q6P1M3 1020 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 TAF2Q6P1X5 1199 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 PHLDB2Q86SQ0 1253 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 WDTC1Q8N5D0 677 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 PRELID2Q8N945 189 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 C12orf50Q8NA57 414 aaPredicted RBP20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 BEST2Q8NFU1 509 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 MTG1Q9BT17 334 aaPredicted RBP20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 TRIM6Q9C030 488 aaPredicted RBP20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 ERVK-5Q9HDB9 667 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 CNTN3Q9P232 1028 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 PCYOX1Q9UHG3 505 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 CASP8AP2Q9UKL3 1982 aa20.01■□□□□ 0.79
SEMA3D-202ENST00000444867 VDRP11473 427 aa20■□□□□ 0.79
SEMA3D-202ENST00000444867 CYBAP13498 195 aa20■□□□□ 0.79
SEMA3D-202ENST00000444867 CTGFP29279 349 aa20■□□□□ 0.79
SEMA3D-202ENST00000444867 DENND1BQ6P3S1 775 aa20■□□□□ 0.79
SEMA3D-202ENST00000444867 LRRC52Q8N7C0 313 aa20■□□□□ 0.79
SEMA3D-202ENST00000444867 C3orf20Q8ND61 904 aa20■□□□□ 0.79
SEMA3D-202ENST00000444867 DDX27Q96GQ7 796 aaKnown RBP20■□□□□ 0.79
SEMA3D-202ENST00000444867 GDAP1L1Q96MZ0 367 aa20■□□□□ 0.79
SEMA3D-202ENST00000444867 EIF2AQ9BY44 585 aaKnown RBP20■□□□□ 0.79
SEMA3D-202ENST00000444867 ELOVL4Q9GZR5 314 aa20■□□□□ 0.79
SEMA3D-202ENST00000444867 UPF3AQ9H1J1 476 aaKnown RBP20■□□□□ 0.79
SEMA3D-202ENST00000444867 ST7Q9NRC1 585 aa20■□□□□ 0.79
SEMA3D-202ENST00000444867 CREBZFQ9NS37 354 aa20■□□□□ 0.79
SEMA3D-202ENST00000444867 WDR35Q9P2L0 1181 aa20■□□□□ 0.79
SEMA3D-202ENST00000444867 SCN10AQ9Y5Y9 1956 aa20■□□□□ 0.79
SEMA3D-202ENST00000444867 FNTAP49354 379 aa19.99■□□□□ 0.79
SEMA3D-202ENST00000444867 NKX3-2P78367 333 aa19.99■□□□□ 0.79
SEMA3D-202ENST00000444867 CNGA2Q16280 664 aa19.99■□□□□ 0.79
SEMA3D-202ENST00000444867 PPP1R15BQ5SWA1 713 aa19.99■□□□□ 0.79
SEMA3D-202ENST00000444867 ALKAL1Q6UXT8 129 aa19.99■□□□□ 0.79
SEMA3D-202ENST00000444867 KATNAL2Q8IYT4 538 aa19.99■□□□□ 0.79
SEMA3D-202ENST00000444867 TRPV1Q8NER1 839 aa19.99■□□□□ 0.79
SEMA3D-202ENST00000444867 MAGOHBQ96A72 148 aaKnown RBP19.99■□□□□ 0.79
SEMA3D-202ENST00000444867 PLEKHA4Q9H4M7 779 aa19.99■□□□□ 0.79
SEMA3D-202ENST00000444867 GOLGA6BA6NDN3 693 aa19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 PODXLO00592 558 aa19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 HMGCRP04035 888 aa19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 GBP1P32455 592 aa19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 GUCY2FP51841 1108 aa19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 DRG2P55039 364 aaKnown RBP19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 HLTFQ14527 1009 aaKnown RBP eCLIP19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 STILQ15468 1287 aa19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 ADAT2Q7Z6V5 191 aaKnown RBP19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 ERP44Q9BS26 406 aa19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 SPC25Q9HBM1 224 aa19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 UBQLN1Q9UMX0 589 aaKnown RBP19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 PIN4Q9Y237 131 aaKnown RBP19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 XPOTO43592 962 aaKnown RBP19.98■□□□□ 0.79
SEMA3D-202ENST00000444867 HSF2BPO75031 334 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms