RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 IQCEQ6IPM2 695 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 SYCE2Q6PIF2 218 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 GPR149Q86SP6 731 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 ADHFE1Q8IWW8 467 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 OR5B17Q8NGF7 314 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 SMG7Q92540 1137 aaKnown RBP13.15□□□□□ -0.3
LTBR-204ENST00000444814 ERCC4Q92889 916 aaPredicted RBP13.15□□□□□ -0.3
LTBR-204ENST00000444814 ACSF2Q96CM8 615 aaPredicted RBP13.15□□□□□ -0.3
LTBR-204ENST00000444814 MMS19Q96T76 1030 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 LRRIQ3A6PVS8 624 aaPredicted RBP13.15□□□□□ -0.3
LTBR-204ENST00000444814 AKAP3O75969 853 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 CCDC192P0DO97 292 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 PIK3CAP42336 1068 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 TUFMP49411 452 aaKnown RBP13.15□□□□□ -0.3
LTBR-204ENST00000444814 GPR17Q13304 367 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 NCOA4Q13772 614 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 ZNF699Q32M78 642 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 TCERG1LQ5VWI1 586 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 ANKRD40Q6AI12 368 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 OTOP3Q7RTS5 596 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 FILIP1Q7Z7B0 1213 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 ADGRF2Q8IZF7 708 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 TTC39CQ8N584 583 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 LEMD2Q8NC56 503 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 PRKD2Q9BZL6 878 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 S1PR5Q9H228 398 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 SNX25Q9H3E2 840 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 TMEM8AQ9HCN3 771 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 CTNND2Q9UQB3 1225 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 TIMM13Q9Y5L4 95 aaPredicted RBP13.15□□□□□ -0.3
LTBR-204ENST00000444814 PDCD11Q14690 1871 aaKnown RBP13.15□□□□□ -0.31
LTBR-204ENST00000444814 PPEF2O14830 753 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 TBC1D4O60343 1298 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 ABLIM3O94929 683 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 ALDH1A3P47895 512 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 CASP4P49662 377 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 VEPH1Q14D04 833 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 WDR72Q3MJ13 1102 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 ZACNQ401N2 412 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 WDR44Q5JSH3 913 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 WSCD1Q658N2 575 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 KRT39Q6A163 491 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 SASS6Q6UVJ0 657 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 TMC5Q6UXY8 1006 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 FRMD5Q7Z6J6 570 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 FAM114A1Q8IWE2 563 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 TCEAL8Q8IYN2 117 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 SLC7A14Q8TBB6 771 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 SPPL2BQ8TCT7 592 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 SUSD6Q92537 303 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 FAXDC2Q96IV6 333 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 DCBLD2Q96PD2 775 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 ACBD6Q9BR61 282 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 VRTNQ9H8Y1 702 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 SIX4Q9UIU6 781 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 RWDD2AQ9UIY3 292 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 USTQ9Y2C2 406 aa13.14□□□□□ -0.31
LTBR-204ENST00000444814 ZNF197O14709 1029 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 SPTLC1O15269 473 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 FGF19O95750 216 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 IL9P15248 144 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 MXI1P50539 228 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 EPHB3P54753 998 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 WNT7BP56706 349 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 ADCY1Q08828 1119 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 GLIPR1L2Q4G1C9 344 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 DCAF17Q5H9S7 520 aaPredicted RBP13.13□□□□□ -0.31
LTBR-204ENST00000444814 C4orf50Q6ZRC1 276 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 SV2AQ7L0J3 742 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 ITIH5Q86UX2 942 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 PDCL2Q8N4E4 241 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 TDRD5Q8NAT2 981 aaKnown RBP13.13□□□□□ -0.31
LTBR-204ENST00000444814 ZNF512Q96ME7 567 aaPredicted RBP13.13□□□□□ -0.31
LTBR-204ENST00000444814 APOL5Q9BWW9 433 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 DDX43Q9NXZ2 648 aaKnown RBP13.13□□□□□ -0.31
LTBR-204ENST00000444814 MAGEC2Q9UBF1 373 aaPredicted RBP13.13□□□□□ -0.31
LTBR-204ENST00000444814 CDH9Q9ULB4 789 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 POLIQ9UNA4 740 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 ASB3Q9Y575 518 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 ZFP37Q9Y6Q3 630 aaPredicted RBP13.13□□□□□ -0.31
LTBR-204ENST00000444814 CHD9Q3L8U1 2897 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 ATP8B3O60423 1300 aa13.13□□□□□ -0.31
LTBR-204ENST00000444814 TRIP11Q15643 1979 aa13.12□□□□□ -0.31
LTBR-204ENST00000444814 WDR27A2RRH5 827 aa13.12□□□□□ -0.31
LTBR-204ENST00000444814 PPP1R3GB7ZBB8 358 aa13.12□□□□□ -0.31
LTBR-204ENST00000444814 TACC1O75410 805 aa13.12□□□□□ -0.31
LTBR-204ENST00000444814 C4BPAP04003 597 aaKnown RBP13.12□□□□□ -0.31
LTBR-204ENST00000444814 SPATA31D3P0C874 917 aa13.12□□□□□ -0.31
LTBR-204ENST00000444814 WARSP23381 471 aaKnown RBP13.12□□□□□ -0.31
LTBR-204ENST00000444814 ERCC5P28715 1186 aaPredicted RBP13.12□□□□□ -0.31
LTBR-204ENST00000444814 YWHAEP62258 255 aaKnown RBP13.12□□□□□ -0.31
LTBR-204ENST00000444814 TAF12Q16514 161 aa13.12□□□□□ -0.31
LTBR-204ENST00000444814 CCDC183Q5T5S1 534 aa13.12□□□□□ -0.31
LTBR-204ENST00000444814 TDRD10Q5VZ19 366 aaKnown RBP13.12□□□□□ -0.31
LTBR-204ENST00000444814 SPATA31D4Q6ZUB0 917 aa13.12□□□□□ -0.31
LTBR-204ENST00000444814 ZC3H3Q8IXZ2 948 aaKnown RBP13.12□□□□□ -0.31
LTBR-204ENST00000444814 BORCS6Q96GS4 357 aa13.12□□□□□ -0.31
LTBR-204ENST00000444814 TNIP3Q96KP6 325 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 438.9 ms