RNA–Protein interactions for RNA: ENST00000444811.6

NELFE-206, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-206ENST00000444811 NOTCH4Q99466 2003 aa21.15■□□□□ 0.98
NELFE-206ENST00000444811 MTMR11A4FU01 709 aa21.14■□□□□ 0.97
NELFE-206ENST00000444811 PRRG1O14668 218 aa21.14■□□□□ 0.97
NELFE-206ENST00000444811 DCXO43602 365 aa21.14■□□□□ 0.97
NELFE-206ENST00000444811 XYLBO75191 536 aa21.14■□□□□ 0.97
NELFE-206ENST00000444811 DLG4P78352 724 aa21.14■□□□□ 0.97
NELFE-206ENST00000444811 LIMS2Q7Z4I7 341 aa21.14■□□□□ 0.97
NELFE-206ENST00000444811 OSTM1Q86WC4 334 aa21.14■□□□□ 0.97
NELFE-206ENST00000444811 METTL23Q86XA0 190 aa21.14■□□□□ 0.97
NELFE-206ENST00000444811 HPDLQ96IR7 371 aa21.14■□□□□ 0.97
NELFE-206ENST00000444811 PGLYRP2Q96PD5 576 aa21.14■□□□□ 0.97
NELFE-206ENST00000444811 MYADMQ96S97 322 aa21.14■□□□□ 0.97
NELFE-206ENST00000444811 HCFC1R1Q9NWW0 138 aa21.14■□□□□ 0.97
NELFE-206ENST00000444811 HCN4Q9Y3Q4 1203 aa21.14■□□□□ 0.97
NELFE-206ENST00000444811 DOCK8Q8NF50 2099 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 MAPK13O15264 365 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 AKAP3O75969 853 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 C4BPAP04003 597 aaKnown RBP21.13■□□□□ 0.97
NELFE-206ENST00000444811 SOWAHAQ2M3V2 549 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 EDRF1Q3B7T1 1238 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 C1orf220Q5T0J3 134 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 TDRD10Q5VZ19 366 aaKnown RBP21.13■□□□□ 0.97
NELFE-206ENST00000444811 CENPPQ6IPU0 288 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 CLEC17AQ6ZS10 378 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 OTOP3Q7RTS5 596 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 LRRTM3Q86VH5 581 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 TOP6BLQ8N6T0 577 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 ATAD1Q8NBU5 361 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 TMC2Q8TDI7 906 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 POLIQ9UNA4 740 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 FRMD4BQ9Y2L6 1034 aa21.13■□□□□ 0.97
NELFE-206ENST00000444811 HUS1O60921 280 aa21.12■□□□□ 0.97
NELFE-206ENST00000444811 LRG1P02750 347 aa21.12■□□□□ 0.97
NELFE-206ENST00000444811 PMS1P54277 932 aaKnown RBP21.12■□□□□ 0.97
NELFE-206ENST00000444811 MYO1EQ12965 1108 aa21.12■□□□□ 0.97
NELFE-206ENST00000444811 DUSP4Q13115 394 aa21.12■□□□□ 0.97
NELFE-206ENST00000444811 ADAM9Q13443 819 aa21.12■□□□□ 0.97
NELFE-206ENST00000444811 ISM2Q6H9L7 571 aa21.12■□□□□ 0.97
NELFE-206ENST00000444811 GET4Q7L5D6 327 aaPredicted RBP21.12■□□□□ 0.97
NELFE-206ENST00000444811 ADGRF2Q8IZF7 708 aa21.12■□□□□ 0.97
NELFE-206ENST00000444811 THEM5Q8N1Q8 247 aa21.12■□□□□ 0.97
NELFE-206ENST00000444811 TMEM86AQ8N2M4 240 aa21.12■□□□□ 0.97
NELFE-206ENST00000444811 PLCD3Q8N3E9 789 aa21.12■□□□□ 0.97
NELFE-206ENST00000444811 TTC9BQ8N6N2 239 aa21.12■□□□□ 0.97
NELFE-206ENST00000444811 ACSF2Q96CM8 615 aaPredicted RBP21.12■□□□□ 0.97
NELFE-206ENST00000444811 YIPF1Q9Y548 306 aa21.12■□□□□ 0.97
NELFE-206ENST00000444811 GABRDO14764 452 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 HCRTO43612 131 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 STAU1O95793 577 aaKnown RBP21.11■□□□□ 0.97
NELFE-206ENST00000444811 ALADP13716 330 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 CD44P16070 742 aaKnown RBP21.11■□□□□ 0.97
NELFE-206ENST00000444811 BMP6P22004 513 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 FSHRP23945 695 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 MYL6P60660 151 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 TWF1Q12792 350 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 SLC39A12Q504Y0 691 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 DPH6Q7L8W6 267 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 ADSSL1Q8N142 457 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 SPATA18Q8TC71 538 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 KBTBD7Q8WVZ9 684 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 XYLT2Q9H1B5 865 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 TMLHEQ9NVH6 421 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 CEP72Q9P209 647 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 LIMD1Q9UGP4 676 aa21.11■□□□□ 0.97
NELFE-206ENST00000444811 R3HCC1Q9Y3T6 440 aaKnown RBP21.11■□□□□ 0.97
NELFE-206ENST00000444811 VNN1O95497 513 aa21.1■□□□□ 0.97
NELFE-206ENST00000444811 ASGR2P07307 311 aa21.1■□□□□ 0.97
NELFE-206ENST00000444811 RPL13P26373 211 aaKnown RBP21.1■□□□□ 0.97
NELFE-206ENST00000444811 GBP2P32456 591 aaPredicted RBP21.1■□□□□ 0.97
NELFE-206ENST00000444811 VAMP7P51809 220 aa21.1■□□□□ 0.97
NELFE-206ENST00000444811 CDR1P51861 262 aa21.1■□□□□ 0.97
NELFE-206ENST00000444811 AP3M2P53677 418 aa21.1■□□□□ 0.97
NELFE-206ENST00000444811 MCCD1P59942 119 aaPredicted RBP21.1■□□□□ 0.97
NELFE-206ENST00000444811 PTPN21Q16825 1174 aa21.1■□□□□ 0.97
NELFE-206ENST00000444811 ZC3H3Q8IXZ2 948 aaKnown RBP21.1■□□□□ 0.97
NELFE-206ENST00000444811 FAM186BQ8IYM0 893 aa21.1■□□□□ 0.97
NELFE-206ENST00000444811 ITFG1Q8TB96 612 aa21.1■□□□□ 0.97
NELFE-206ENST00000444811 IPO9Q96P70 1041 aaKnown RBP21.1■□□□□ 0.97
NELFE-206ENST00000444811 PKMYT1Q99640 499 aa21.1■□□□□ 0.97
NELFE-206ENST00000444811 GTPBP4Q9BZE4 634 aaKnown RBP21.1■□□□□ 0.97
NELFE-206ENST00000444811 DDX43Q9NXZ2 648 aaKnown RBP21.1■□□□□ 0.97
NELFE-206ENST00000444811 EPS15L1Q9UBC2 864 aa21.1■□□□□ 0.97
NELFE-206ENST00000444811 SLC27A5Q9Y2P5 690 aa21.1■□□□□ 0.97
NELFE-206ENST00000444811 TRIM49BA6NDI0 452 aa21.09■□□□□ 0.97
NELFE-206ENST00000444811 NRG2O14511 850 aaPredicted RBP21.09■□□□□ 0.97
NELFE-206ENST00000444811 RHOP08100 348 aa21.09■□□□□ 0.97
NELFE-206ENST00000444811 ACAT1P24752 427 aaKnown RBP21.09■□□□□ 0.97
NELFE-206ENST00000444811 PSMC2P35998 433 aaKnown RBP21.09■□□□□ 0.97
NELFE-206ENST00000444811 BIRC3Q13489 604 aa21.09■□□□□ 0.97
NELFE-206ENST00000444811 TRPC3Q13507 836 aa21.09■□□□□ 0.97
NELFE-206ENST00000444811 MORC3Q14149 939 aa21.09■□□□□ 0.97
NELFE-206ENST00000444811 SLC5A9Q2M3M2 681 aa21.09■□□□□ 0.97
NELFE-206ENST00000444811 ZACNQ401N2 412 aa21.09■□□□□ 0.97
NELFE-206ENST00000444811 PABPC1LQ4VXU2 614 aaKnown RBP21.09■□□□□ 0.97
NELFE-206ENST00000444811 ANKRD40Q6AI12 368 aa21.09■□□□□ 0.97
NELFE-206ENST00000444811 EEF2KMTQ96G04 330 aa21.09■□□□□ 0.97
NELFE-206ENST00000444811 ACBD6Q9BR61 282 aa21.09■□□□□ 0.97
NELFE-206ENST00000444811 DNAJC25Q9H1X3 360 aa21.09■□□□□ 0.97
NELFE-206ENST00000444811 AVENQ9NQS1 362 aaPredicted RBP21.09■□□□□ 0.97
NELFE-206ENST00000444811 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms