RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 BEST2Q8NFU1 509 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 SEC14L1Q92503 715 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 SPC25Q9HBM1 224 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 WDR35Q9P2L0 1181 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 NFU1Q9UMS0 254 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 PYGMP11217 842 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 FGFR4P22455 802 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 CETN2P41208 172 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 DR1Q01658 176 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 PTPN11Q06124 597 aaPredicted RBP16.63■□□□□ 0.25
SNX13-204ENST00000444712 INCA1Q0VD86 236 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 SNX17Q15036 470 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 STILQ15468 1287 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 CYP1B1Q16678 543 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 ALS2CLQ60I27 953 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 LENG1Q96BZ8 264 aaPredicted RBP16.63■□□□□ 0.25
SNX13-204ENST00000444712 TMEM176AQ96HP8 235 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 ABT1Q9ULW3 272 aaKnown RBP16.63■□□□□ 0.25
SNX13-204ENST00000444712 VDRP11473 427 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 ATF7P17544 494 aaPredicted RBP16.63■□□□□ 0.25
SNX13-204ENST00000444712 GSCP56915 257 aaPredicted RBP16.63■□□□□ 0.25
SNX13-204ENST00000444712 GJA9P57773 515 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 BEX3Q00994 111 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 HLTFQ14527 1009 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNX13-204ENST00000444712 LRRC52Q8N7C0 313 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 GOLGA6L1Q8N7Z2 621 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 C3orf20Q8ND61 904 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 MTG1Q9BT17 334 aaPredicted RBP16.63■□□□□ 0.25
SNX13-204ENST00000444712 MIS12Q9H081 205 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 SMYD3Q9H7B4 428 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 CNTN3Q9P232 1028 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 PCYOX1Q9UHG3 505 aa16.63■□□□□ 0.25
SNX13-204ENST00000444712 BARX2Q9UMQ3 279 aaPredicted RBP16.63■□□□□ 0.25
SNX13-204ENST00000444712 GOLGA6BA6NDN3 693 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 PODXLO00592 558 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 TTI1O43156 1089 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 TREHO43280 583 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 HSF2BPO75031 334 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 RAP1GAPP47736 663 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 FNTAP49354 379 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 C12orf50Q8NA57 414 aaPredicted RBP16.62■□□□□ 0.25
SNX13-204ENST00000444712 SLC4A11Q8NBS3 891 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 TFAP2BQ92481 460 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 RUFY1Q96T51 708 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 HINFPQ9BQA5 517 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 DNAI2Q9GZS0 605 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 SNTG2Q9NY99 539 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 UBQLN1Q9UMX0 589 aaKnown RBP16.62■□□□□ 0.25
SNX13-204ENST00000444712 SCN10AQ9Y5Y9 1956 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 ESYT3A0FGR9 886 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 TMEM191CA6NGB0 347 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 ZSCAN5CA6NGD5 496 aaPredicted RBP16.62■□□□□ 0.25
SNX13-204ENST00000444712 M0QZ92 97 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 FSCN2O14926 492 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 HMGCRP04035 888 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 C6orf222P0C671 652 aaPredicted RBP16.62■□□□□ 0.25
SNX13-204ENST00000444712 CYBAP13498 195 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 SSTR3P32745 418 aaPredicted RBP16.62■□□□□ 0.25
SNX13-204ENST00000444712 PIGHQ14442 188 aaPredicted RBP16.62■□□□□ 0.25
SNX13-204ENST00000444712 SGO2Q562F6 1265 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 DCUN1D2Q6PH85 259 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 KATNAL2Q8IYT4 538 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 MAGOHBQ96A72 148 aaKnown RBP16.62■□□□□ 0.25
SNX13-204ENST00000444712 LRRC45Q96CN5 670 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 SDCBP2Q9H190 292 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 HOMER3Q9NSC5 361 aa16.62■□□□□ 0.25
SNX13-204ENST00000444712 PIN4Q9Y237 131 aaKnown RBP16.62■□□□□ 0.25
SNX13-204ENST00000444712 CD4P01730 458 aa16.61■□□□□ 0.25
SNX13-204ENST00000444712 DRG2P55039 364 aaKnown RBP16.61■□□□□ 0.25
SNX13-204ENST00000444712 CNGA2Q16280 664 aa16.61■□□□□ 0.25
SNX13-204ENST00000444712 C2CD6Q53TS8 623 aa16.61■□□□□ 0.25
SNX13-204ENST00000444712 LRRC38Q5VT99 294 aa16.61■□□□□ 0.25
SNX13-204ENST00000444712 RSPH3Q86UC2 560 aa16.61■□□□□ 0.25
SNX13-204ENST00000444712 PRELID2Q8N945 189 aa16.61■□□□□ 0.25
SNX13-204ENST00000444712 EIF2AQ9BY44 585 aaKnown RBP16.61■□□□□ 0.25
SNX13-204ENST00000444712 UPF3AQ9H1J1 476 aaKnown RBP16.61■□□□□ 0.25
SNX13-204ENST00000444712 CDHR5Q9HBB8 845 aa16.61■□□□□ 0.25
SNX13-204ENST00000444712 ERVK-5Q9HDB9 667 aa16.61■□□□□ 0.25
SNX13-204ENST00000444712 TCRBV5S1A1TA0A578 114 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 H3BQF6 201 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 OPA1O60313 960 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 PSMC4P43686 418 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 CDH8P55286 799 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 ZBTB6Q15916 424 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 ADAT2Q7Z6V5 191 aaKnown RBP16.6■□□□□ 0.25
SNX13-204ENST00000444712 PHLDB2Q86SQ0 1253 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 NIPA2Q8N8Q9 360 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 SMC1BQ8NDV3 1235 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 EXD1Q8NHP7 514 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 DDX27Q96GQ7 796 aaKnown RBP16.6■□□□□ 0.25
SNX13-204ENST00000444712 PKNOX2Q96KN3 472 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 GDAP1L1Q96MZ0 367 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 ERP44Q9BS26 406 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 NT5C1AQ9BXI3 368 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 FAM129AQ9BZQ8 928 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 TRIM7Q9C029 511 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 ELOVL4Q9GZR5 314 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 PARP2Q9UGN5 583 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNX13-204ENST00000444712 TMEM88BA6NKF7 163 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms