RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 FOSBP53539 338 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 ANAPC15P60006 121 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 MCL1Q07820 350 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 ST3GAL1Q11201 340 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 NOLC1Q14978 699 aaKnown RBP eCLIP15.67■□□□□ 0.1
HMGN1-208ENST00000443046 PLK5Q496M5 336 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 RINT1Q6NUQ1 792 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 CAMKK1Q8N5S9 505 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 IGSF22Q8N9C0 903 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 TMEM161BQ8NDZ6 487 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 DRC1Q96MC2 740 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 RUSC1Q9BVN2 902 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 HAPLN2Q9GZV7 340 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 DUSP15Q9H1R2 295 aaPredicted RBP15.67■□□□□ 0.1
HMGN1-208ENST00000443046 SMOC1Q9H4F8 434 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 TASP1Q9H6P5 420 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 LRWD1Q9UFC0 647 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.67■□□□□ 0.1
HMGN1-208ENST00000443046 ITPR1Q14643 2758 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 OTOL1A6NHN0 477 aaPredicted RBP15.66■□□□□ 0.1
HMGN1-208ENST00000443046 E9PMD0 336 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 SLC16A4O15374 487 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 SOAT2O75908 522 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 ADRB2P07550 413 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 CXCL8P10145 99 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 HARSP12081 509 aaKnown RBP15.66■□□□□ 0.1
HMGN1-208ENST00000443046 MCM2P49736 904 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 PTPAQ15257 358 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 ARHGAP15Q53QZ3 475 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 OVOS1Q6IE37 1185 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 ZPBP2Q6X784 338 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 USP37Q86T82 979 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 ITIH5Q86UX2 942 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 KDF1Q8NAX2 398 aaPredicted RBP15.66■□□□□ 0.1
HMGN1-208ENST00000443046 SPIRE2Q8WWL2 714 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 TMEM121BQ9BXQ6 578 aaPredicted RBP15.66■□□□□ 0.1
HMGN1-208ENST00000443046 SLC46A2Q9BY10 475 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 FOXP1Q9H334 677 aaPredicted RBP15.66■□□□□ 0.1
HMGN1-208ENST00000443046 HPS4Q9NQG7 708 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 LOC400499M0QZD8 3231 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 TSC2P49815 1807 aa15.66■□□□□ 0.1
HMGN1-208ENST00000443046 ANK1P16157 1881 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 C1QTNF9BB2RNN3 333 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 CLTAP09496 248 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 C1QTNF9P0C862 333 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 CCDC192P0DO97 292 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 MAPTP10636 758 aaKnown RBP15.65■□□□□ 0.1
HMGN1-208ENST00000443046 SPAG1Q07617 926 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 RNF43Q68DV7 783 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 PSAPL1Q6NUJ1 521 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 KCNN1Q92952 543 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 TIPINQ9BVW5 301 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 GKN1Q9NS71 199 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 THG1LQ9NWX6 298 aaKnown RBP15.65■□□□□ 0.1
HMGN1-208ENST00000443046 ANKFY1Q9P2R3 1169 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 UBQLN1Q9UMX0 589 aaKnown RBP15.65■□□□□ 0.1
HMGN1-208ENST00000443046 SLC8A2Q9UPR5 921 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 DNM3Q9UQ16 869 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 STK24Q9Y6E0 443 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 MYH11P35749 1972 aa15.65■□□□□ 0.1
HMGN1-208ENST00000443046 SFI1A8K8P3 1242 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 PPEF2O14830 753 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 CLDN3O15551 220 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 FAM189A1O60320 539 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 ATF6P18850 670 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 GUCY2CP25092 1073 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 CDC25CP30307 473 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 TRAPPC10P48553 1259 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 LILRA4P59901 499 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 CYP4F8P98187 520 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 GUCY1B3Q02153 619 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 GRSF1Q12849 480 aaKnown RBP eCLIP15.64■□□□□ 0.09
HMGN1-208ENST00000443046 STRN3Q13033 797 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 RUNX3Q13761 415 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 SAFBQ15424 915 aaKnown RBP eCLIP15.64■□□□□ 0.09
HMGN1-208ENST00000443046 TTC38Q5R3I4 469 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 TCEAL6Q6IPX3 200 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 UNQ6494/PRO21346Q6UXR6 183 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 DSTYKQ6XUX3 929 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 KCNK18Q7Z418 384 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 TMEM150AQ86TG1 271 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 OR10T2Q8NGX3 314 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 SNX29Q8TEQ0 813 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 NUP205Q92621 2012 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 TCEAL3Q969E4 200 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 KIF12Q96FN5 646 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 LPIN3Q9BQK8 851 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 SMG9Q9H0W8 520 aaKnown RBP15.64■□□□□ 0.09
HMGN1-208ENST00000443046 FBRSL1Q9HCM7 1045 aaKnown RBP15.64■□□□□ 0.09
HMGN1-208ENST00000443046 SH2B1Q9NRF2 756 aaPredicted RBP15.64■□□□□ 0.09
HMGN1-208ENST00000443046 POLR3BQ9NW08 1133 aaPredicted RBP15.64■□□□□ 0.09
HMGN1-208ENST00000443046 EBF1Q9UH73 591 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 ZMYM5Q9UJ78 669 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 ZMIZ1Q9ULJ6 1067 aa15.64■□□□□ 0.09
HMGN1-208ENST00000443046 LACTBL1A8MY62 500 aa15.63■□□□□ 0.09
HMGN1-208ENST00000443046 RNF40O75150 1001 aa15.63■□□□□ 0.09
HMGN1-208ENST00000443046 CYP11A1P05108 521 aa15.63■□□□□ 0.09
HMGN1-208ENST00000443046 PLS3P13797 630 aa15.63■□□□□ 0.09
HMGN1-208ENST00000443046 PAX3P23760 479 aa15.63■□□□□ 0.09
HMGN1-208ENST00000443046 TNFSF9P41273 254 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms