RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 HOXD13P35453 343 aa29.2■■■□□ 2.26
MRPL28-204ENST00000441883 ALDH1A3P47895 512 aa29.2■■■□□ 2.26
MRPL28-204ENST00000441883 TFAMQ00059 246 aaKnown RBP29.2■■■□□ 2.26
MRPL28-204ENST00000441883 LRRTM3Q86VH5 581 aa29.2■■■□□ 2.26
MRPL28-204ENST00000441883 HSCBQ8IWL3 235 aa29.2■■■□□ 2.26
MRPL28-204ENST00000441883 DHX58Q96C10 678 aa29.2■■■□□ 2.26
MRPL28-204ENST00000441883 LRRC27Q9C0I9 530 aa29.2■■■□□ 2.26
MRPL28-204ENST00000441883 TRPV4Q9HBA0 871 aa29.2■■■□□ 2.26
MRPL28-204ENST00000441883 RBAKQ9NYW8 714 aaPredicted RBP29.2■■■□□ 2.26
MRPL28-204ENST00000441883 F5P12259 2224 aa29.19■■■□□ 2.26
MRPL28-204ENST00000441883 SHISA7A6NL88 538 aa29.19■■■□□ 2.26
MRPL28-204ENST00000441883 F13A1P00488 732 aa29.19■■■□□ 2.26
MRPL28-204ENST00000441883 PDIA4P13667 645 aaKnown RBP29.19■■■□□ 2.26
MRPL28-204ENST00000441883 CD72P21854 359 aa29.19■■■□□ 2.26
MRPL28-204ENST00000441883 CDR1P51861 262 aa29.19■■■□□ 2.26
MRPL28-204ENST00000441883 GRM2Q14416 872 aa29.19■■■□□ 2.26
MRPL28-204ENST00000441883 FOXD4L6Q3SYB3 417 aaPredicted RBP29.19■■■□□ 2.26
MRPL28-204ENST00000441883 SV2CQ496J9 727 aa29.19■■■□□ 2.26
MRPL28-204ENST00000441883 SLC39A12Q504Y0 691 aa29.19■■■□□ 2.26
MRPL28-204ENST00000441883 CNNM4Q6P4Q7 775 aa29.19■■■□□ 2.26
MRPL28-204ENST00000441883 FOXD4L3Q6VB84 417 aaPredicted RBP29.19■■■□□ 2.26
MRPL28-204ENST00000441883 DNAJB7Q7Z6W7 309 aaPredicted RBP29.19■■■□□ 2.26
MRPL28-204ENST00000441883 METTL23Q86XA0 190 aa29.19■■■□□ 2.26
MRPL28-204ENST00000441883 C1orf127Q8N9H9 656 aa29.19■■■□□ 2.26
MRPL28-204ENST00000441883 ZNF334Q9HCZ1 680 aaPredicted RBP29.19■■■□□ 2.26
MRPL28-204ENST00000441883 ASB3Q9Y575 518 aa29.19■■■□□ 2.26
MRPL28-204ENST00000441883 VIPR2P41587 438 aa29.18■■■□□ 2.26
MRPL28-204ENST00000441883 PKP1Q13835 747 aa29.18■■■□□ 2.26
MRPL28-204ENST00000441883 VITQ6UXI7 678 aa29.18■■■□□ 2.26
MRPL28-204ENST00000441883 THEM5Q8N1Q8 247 aa29.18■■■□□ 2.26
MRPL28-204ENST00000441883 IQUBQ8NA54 791 aa29.18■■■□□ 2.26
MRPL28-204ENST00000441883 ZSCAN18Q8TBC5 510 aaPredicted RBP29.18■■■□□ 2.26
MRPL28-204ENST00000441883 PSMG2Q969U7 264 aa29.18■■■□□ 2.26
MRPL28-204ENST00000441883 OSBPL6Q9BZF3 934 aa29.18■■■□□ 2.26
MRPL28-204ENST00000441883 PDE11AQ9HCR9 933 aa29.18■■■□□ 2.26
MRPL28-204ENST00000441883 AGAP1Q9UPQ3 857 aa29.18■■■□□ 2.26
MRPL28-204ENST00000441883 FAM186AA6NE01 2351 aa29.18■■■□□ 2.26
MRPL28-204ENST00000441883 NCANO14594 1321 aa29.18■■■□□ 2.26
MRPL28-204ENST00000441883 A0A1W2PRU2 124 aa29.17■■■□□ 2.26
MRPL28-204ENST00000441883 PRR23AA6NEV1 266 aa29.17■■■□□ 2.26
MRPL28-204ENST00000441883 ITGB3P05106 788 aa29.17■■■□□ 2.26
MRPL28-204ENST00000441883 POLR2BP30876 1174 aaKnown RBP29.17■■■□□ 2.26
MRPL28-204ENST00000441883 GAREM2Q75VX8 874 aa29.17■■■□□ 2.26
MRPL28-204ENST00000441883 TRMT61BQ9BVS5 477 aaKnown RBP29.17■■■□□ 2.26
MRPL28-204ENST00000441883 GPR88Q9GZN0 384 aa29.17■■■□□ 2.26
MRPL28-204ENST00000441883 HEBP1Q9NRV9 189 aa29.17■■■□□ 2.26
MRPL28-204ENST00000441883 FAM170BA6NMN3 283 aa29.16■■■□□ 2.26
MRPL28-204ENST00000441883 AMPD3Q01432 767 aa29.16■■■□□ 2.26
MRPL28-204ENST00000441883 TPRG1Q6ZUI0 275 aa29.16■■■□□ 2.26
MRPL28-204ENST00000441883 EPM2AIP1Q7L775 607 aaPredicted RBP29.16■■■□□ 2.26
MRPL28-204ENST00000441883 C1orf210Q8IVY1 113 aa29.16■■■□□ 2.26
MRPL28-204ENST00000441883 GPD1LQ8N335 351 aa29.16■■■□□ 2.26
MRPL28-204ENST00000441883 CACTINQ8WUQ7 758 aaKnown RBP29.16■■■□□ 2.26
MRPL28-204ENST00000441883 DNASE1L2Q92874 299 aa29.16■■■□□ 2.26
MRPL28-204ENST00000441883 RSPRY1Q96DX4 576 aa29.16■■■□□ 2.26
MRPL28-204ENST00000441883 ZNF560Q96MR9 790 aa29.16■■■□□ 2.26
MRPL28-204ENST00000441883 C7orf25Q9BPX7 421 aa29.16■■■□□ 2.26
MRPL28-204ENST00000441883 MKNK1Q9BUB5 465 aa29.16■■■□□ 2.26
MRPL28-204ENST00000441883 LTB4R2Q9NPC1 389 aa29.16■■■□□ 2.26
MRPL28-204ENST00000441883 PCDHA7Q9UN72 937 aa29.16■■■□□ 2.26
MRPL28-204ENST00000441883 TULP1O00294 542 aaPredicted RBP29.15■■■□□ 2.26
MRPL28-204ENST00000441883 PSMC3P17980 439 aa29.15■■■□□ 2.26
MRPL28-204ENST00000441883 ATF6P18850 670 aa29.15■■■□□ 2.26
MRPL28-204ENST00000441883 PNPLA4P41247 253 aa29.15■■■□□ 2.26
MRPL28-204ENST00000441883 TUFMP49411 452 aaKnown RBP29.15■■■□□ 2.26
MRPL28-204ENST00000441883 ASIC1P78348 528 aa29.15■■■□□ 2.26
MRPL28-204ENST00000441883 UBXN2BQ14CS0 331 aa29.15■■■□□ 2.26
MRPL28-204ENST00000441883 ZNF507Q8TCN5 953 aa29.15■■■□□ 2.26
MRPL28-204ENST00000441883 KCNG4Q8TDN1 519 aa29.15■■■□□ 2.26
MRPL28-204ENST00000441883 BRD9Q9H8M2 597 aa29.15■■■□□ 2.26
MRPL28-204ENST00000441883 SIX4Q9UIU6 781 aa29.15■■■□□ 2.26
MRPL28-204ENST00000441883 COL4A2P08572 1712 aa29.14■■■□□ 2.26
MRPL28-204ENST00000441883 POLR2DO15514 142 aaKnown RBP29.14■■■□□ 2.26
MRPL28-204ENST00000441883 HSP90AA1P07900 732 aaKnown RBP29.14■■■□□ 2.26
MRPL28-204ENST00000441883 EHHADHQ08426 723 aa29.14■■■□□ 2.26
MRPL28-204ENST00000441883 STXBP5Q5T5C0 1151 aa29.14■■■□□ 2.26
MRPL28-204ENST00000441883 STXBP4Q6ZWJ1 553 aa29.14■■■□□ 2.26
MRPL28-204ENST00000441883 MAML2Q8IZL2 1156 aaPredicted RBP29.14■■■□□ 2.26
MRPL28-204ENST00000441883 PDCL2Q8N4E4 241 aa29.14■■■□□ 2.26
MRPL28-204ENST00000441883 CSGALNACT2Q8N6G5 542 aa29.14■■■□□ 2.26
MRPL28-204ENST00000441883 NOC3LQ8WTT2 800 aaKnown RBP29.14■■■□□ 2.26
MRPL28-204ENST00000441883 NKD2Q969F2 451 aaPredicted RBP29.14■■■□□ 2.26
MRPL28-204ENST00000441883 SEPT5Q99719 369 aaPredicted RBP29.14■■■□□ 2.26
MRPL28-204ENST00000441883 LPIN3Q9BQK8 851 aa29.14■■■□□ 2.26
MRPL28-204ENST00000441883 TMLHEQ9NVH6 421 aa29.14■■■□□ 2.26
MRPL28-204ENST00000441883 ITGA11Q9UKX5 1188 aa29.14■■■□□ 2.26
MRPL28-204ENST00000441883 L1RE1Q9UN81 338 aa29.14■■■□□ 2.26
MRPL28-204ENST00000441883 KIAA0391O15091 583 aaKnown RBP29.13■■■□□ 2.25
MRPL28-204ENST00000441883 EIF3DO15371 548 aaKnown RBP eCLIP29.13■■■□□ 2.25
MRPL28-204ENST00000441883 TARSP26639 723 aaKnown RBP29.13■■■□□ 2.25
MRPL28-204ENST00000441883 CASP1P29466 404 aa29.13■■■□□ 2.25
MRPL28-204ENST00000441883 SMARCB1Q12824 385 aa29.13■■■□□ 2.25
MRPL28-204ENST00000441883 FZD5Q13467 585 aa29.13■■■□□ 2.25
MRPL28-204ENST00000441883 MGAT5BQ3V5L5 792 aa29.13■■■□□ 2.25
MRPL28-204ENST00000441883 ATL3Q6DD88 541 aa29.13■■■□□ 2.25
MRPL28-204ENST00000441883 ITIH5Q86UX2 942 aa29.13■■■□□ 2.25
MRPL28-204ENST00000441883 CBWD2Q8IUF1 395 aa29.13■■■□□ 2.25
MRPL28-204ENST00000441883 MFSD6LQ8IWD5 586 aa29.13■■■□□ 2.25
MRPL28-204ENST00000441883 LRRC52Q8N7C0 313 aa29.13■■■□□ 2.25
MRPL28-204ENST00000441883 SPRYD3Q8NCJ5 442 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms