RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 FAM200BP0CF97 657 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 RAP2AP10114 183 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 VDRP11473 427 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 NCAM1P13591 858 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 CST5P28325 142 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 SLC6A4P31645 630 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 ADD2P35612 726 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 KIR2DL3P43628 341 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 COPAP53621 1224 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 DUSP2Q05923 314 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 PRKG2Q13237 762 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 SMAD4Q13485 552 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 CUL4BQ13620 913 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 ADCK5Q3MIX3 580 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 TMTC4Q5T4D3 741 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 RAP1GAP2Q684P5 730 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 KIAA0408Q6ZU52 694 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 ANKRD23Q86SG2 305 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 VSIG10LQ86VR7 867 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 GATAD2AQ86YP4 633 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 SPSB4Q96A44 273 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 SNX27Q96L92 541 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 CLIC6Q96NY7 704 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 KCNC2Q96PR1 638 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 CHCHD6Q9BRQ6 235 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 KATNBL1Q9H079 304 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 SLC45A2Q9UMX9 530 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 JAG2Q9Y219 1238 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 HS3ST4Q9Y661 456 aa4.67□□□□□ -1.66
CDC42BPA-207ENST00000441725 ZMYM3Q14202 1370 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 KCNQ3O43525 872 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 RRP9O43818 475 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 USP1O94782 785 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 HMGCRP04035 888 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 RARBP10826 455 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 CKBP12277 381 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 GYPEP15421 78 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 EGR1P18146 543 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 BTF3P20290 206 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 CCR5P51681 352 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 PSMC1P62191 440 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 YBX1P67809 324 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 NEXNQ0ZGT2 675 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 MTA1Q13330 715 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 CRTC1Q6UUV9 634 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 ZDHHC24Q6UX98 284 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 C4orf50Q6ZRC1 276 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 SCAMP5Q8TAC9 235 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 AFG1LQ8WV93 481 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 IPCEF1Q8WWN9 437 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 RAPGEF4Q8WZA2 1011 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 CEP95Q96GE4 821 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 PCDHAC1Q9H158 963 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 PABPC3Q9H361 631 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 HEYLQ9NQ87 328 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 LPAR3Q9UBY5 353 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 HERC5Q9UII4 1024 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 PRDM4Q9UKN5 801 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 VWA7Q9Y334 891 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 PAXBP1Q9Y5B6 917 aa4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 RBM8AQ9Y5S9 174 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-207ENST00000441725 TCRBV7S2A1N4TA0A589 114 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 KIAA1324LA8MWY0 1029 aaPredicted RBP4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 RAB27BO00194 218 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 MTSS1O43312 755 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 COBLO75128 1261 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 TOX4O94842 621 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 GNAI2P04899 355 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 GRPP07492 148 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 SSTR4P31391 388 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 TDO2P48775 406 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 POU6F2P78424 691 aaPredicted RBP4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 TLE2Q04725 743 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 SP140Q13342 867 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 PLCL1Q15111 1095 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 DLGAP5Q15398 846 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 MFSD14BQ5SR56 506 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 TRIM68Q6AZZ1 485 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 LARP4Q71RC2 724 aaKnown RBP eCLIP4.65□□□□□ -1.661e-6■■□□□ 13.8
CDC42BPA-207ENST00000441725 KRT28Q7Z3Y7 464 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 YAF2Q8IY57 180 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 PLA2G15Q8NCC3 412 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 UCMAQ8WVF2 138 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 GFM2Q969S9 779 aaKnown RBP4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 PRDM8Q9NQV8 689 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 MOCS1Q9NZB8 636 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 CFAP97Q9P2B7 532 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 ZMYND8Q9ULU4 1186 aaPredicted RBP4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 AGAP1Q9UPQ3 857 aa4.65□□□□□ -1.66
CDC42BPA-207ENST00000441725 KIAA0391O15091 583 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 TEX33O43247 280 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 ACTL6BO94805 426 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 DDX58O95786 925 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 ATF2P15336 505 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 PECAM1P16284 738 aaPredicted RBP4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 VIPR1P32241 457 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 PAPOLAP51003 745 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 NCKAP1LP55160 1127 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 APBA1Q02410 837 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 TOP3AQ13472 1001 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms