RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 BRD2P25440 801 aaKnown RBP29.79■■■□□ 2.36
CGREF1-207ENST00000440612 H2AFVQ71UI9 128 aa29.79■■■□□ 2.36
CGREF1-207ENST00000440612 TTC39CQ8N584 583 aa29.79■■■□□ 2.36
CGREF1-207ENST00000440612 TMEM176AQ96HP8 235 aa29.79■■■□□ 2.36
CGREF1-207ENST00000440612 PAXBP1Q9Y5B6 917 aa29.79■■■□□ 2.36
CGREF1-207ENST00000440612 FAM170AA1A519 330 aa29.78■■■□□ 2.36
CGREF1-207ENST00000440612 BTNL10A8MVZ5 291 aa29.78■■■□□ 2.36
CGREF1-207ENST00000440612 TIMP1P01033 207 aa29.78■■■□□ 2.36
CGREF1-207ENST00000440612 AARSP49588 968 aaKnown RBP eCLIP29.78■■■□□ 2.36
CGREF1-207ENST00000440612 DSC1Q08554 894 aa29.78■■■□□ 2.36
CGREF1-207ENST00000440612 NOMO2Q5JPE7 1267 aa29.78■■■□□ 2.36
CGREF1-207ENST00000440612 SYT10Q6XYQ8 523 aa29.78■■■□□ 2.36
CGREF1-207ENST00000440612 TTC3P53804 2025 aa29.77■■■□□ 2.36
CGREF1-207ENST00000440612 KIF2AO00139 706 aaPredicted RBP29.77■■■□□ 2.36
CGREF1-207ENST00000440612 RTN2O75298 545 aa29.77■■■□□ 2.36
CGREF1-207ENST00000440612 DDHD2O94830 711 aa29.77■■■□□ 2.36
CGREF1-207ENST00000440612 FTLP02792 175 aaPredicted RBP29.77■■■□□ 2.36
CGREF1-207ENST00000440612 RFC2P35250 354 aa29.77■■■□□ 2.36
CGREF1-207ENST00000440612 GNG11P61952 73 aa29.77■■■□□ 2.36
CGREF1-207ENST00000440612 ZNF280BQ86YH2 543 aa29.77■■■□□ 2.36
CGREF1-207ENST00000440612 CYFIP2Q96F07 1278 aa29.77■■■□□ 2.36
CGREF1-207ENST00000440612 PCDH10Q9P2E7 1040 aa29.77■■■□□ 2.36
CGREF1-207ENST00000440612 KIF5CO60282 957 aa29.76■■■□□ 2.36
CGREF1-207ENST00000440612 TUBB4AP04350 444 aa29.76■■■□□ 2.36
CGREF1-207ENST00000440612 SSTR3P32745 418 aaPredicted RBP29.76■■■□□ 2.36
CGREF1-207ENST00000440612 TXLNBQ8N3L3 684 aa29.76■■■□□ 2.36
CGREF1-207ENST00000440612 TBC1D13Q9NVG8 400 aa29.76■■■□□ 2.36
CGREF1-207ENST00000440612 TDRD15B5MCY1 1934 aaKnown RBP29.76■■■□□ 2.35
CGREF1-207ENST00000440612 MACROD2A1Z1Q3 448 aa29.76■■■□□ 2.35
CGREF1-207ENST00000440612 TMEM253P0C7T8 217 aa29.76■■■□□ 2.35
CGREF1-207ENST00000440612 ACAD10Q6JQN1 1059 aa29.76■■■□□ 2.35
CGREF1-207ENST00000440612 PDCL2Q8N4E4 241 aa29.76■■■□□ 2.35
CGREF1-207ENST00000440612 TOP6BLQ8N6T0 577 aa29.76■■■□□ 2.35
CGREF1-207ENST00000440612 DDX27Q96GQ7 796 aaKnown RBP29.76■■■□□ 2.35
CGREF1-207ENST00000440612 CASD1Q96PB1 797 aa29.76■■■□□ 2.35
CGREF1-207ENST00000440612 MYO1AQ9UBC5 1043 aa29.76■■■□□ 2.35
CGREF1-207ENST00000440612 PUF60Q9UHX1 559 aaKnown RBP29.76■■■□□ 2.35
CGREF1-207ENST00000440612 PCDHGC3Q9UN70 934 aa29.76■■■□□ 2.35
CGREF1-207ENST00000440612 PCDHB7Q9Y5E2 793 aa29.76■■■□□ 2.35
CGREF1-207ENST00000440612 ANKRD62A6NC57 917 aa29.75■■■□□ 2.35
CGREF1-207ENST00000440612 HCRTO43612 131 aa29.75■■■□□ 2.35
CGREF1-207ENST00000440612 GATMP50440 423 aa29.75■■■□□ 2.35
CGREF1-207ENST00000440612 NOMO3P69849 1222 aa29.75■■■□□ 2.35
CGREF1-207ENST00000440612 CNKSR3Q6P9H4 555 aa29.75■■■□□ 2.35
CGREF1-207ENST00000440612 DPH6Q7L8W6 267 aa29.75■■■□□ 2.35
CGREF1-207ENST00000440612 ARHGEF26Q96DR7 871 aa29.75■■■□□ 2.35
CGREF1-207ENST00000440612 NT5C1AQ9BXI3 368 aa29.75■■■□□ 2.35
CGREF1-207ENST00000440612 THAP2Q9H0W7 228 aa29.75■■■□□ 2.35
CGREF1-207ENST00000440612 DNAI1Q9UI46 699 aa29.75■■■□□ 2.35
CGREF1-207ENST00000440612 CENPCQ03188 943 aa29.74■■■□□ 2.35
CGREF1-207ENST00000440612 ZNF569Q5MCW4 686 aa29.74■■■□□ 2.35
CGREF1-207ENST00000440612 TRIM72Q6ZMU5 477 aa29.74■■■□□ 2.35
CGREF1-207ENST00000440612 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.74■■■□□ 2.35
CGREF1-207ENST00000440612 UNC93AQ86WB7 457 aa29.74■■■□□ 2.35
CGREF1-207ENST00000440612 OSTM1Q86WC4 334 aa29.74■■■□□ 2.35
CGREF1-207ENST00000440612 PASD1Q8IV76 773 aa29.74■■■□□ 2.35
CGREF1-207ENST00000440612 COLGALT2Q8IYK4 626 aa29.74■■■□□ 2.35
CGREF1-207ENST00000440612 APPL2Q8NEU8 664 aa29.74■■■□□ 2.35
CGREF1-207ENST00000440612 SENP8Q96LD8 212 aa29.74■■■□□ 2.35
CGREF1-207ENST00000440612 UROC1Q96N76 676 aa29.74■■■□□ 2.35
CGREF1-207ENST00000440612 CAPN6Q9Y6Q1 641 aa29.74■■■□□ 2.35
CGREF1-207ENST00000440612 CYB561D2O14569 222 aa29.73■■■□□ 2.35
CGREF1-207ENST00000440612 SLC35F6Q8N357 371 aa29.73■■■□□ 2.35
CGREF1-207ENST00000440612 WDTC1Q8N5D0 677 aa29.73■■■□□ 2.35
CGREF1-207ENST00000440612 RNF10Q8N5U6 811 aaKnown RBP29.73■■■□□ 2.35
CGREF1-207ENST00000440612 SECISBP2LQ93073 1101 aaKnown RBP29.73■■■□□ 2.35
CGREF1-207ENST00000440612 PRDM5Q9NQX1 630 aaPredicted RBP29.73■■■□□ 2.35
CGREF1-207ENST00000440612 NCANO14594 1321 aa29.73■■■□□ 2.35
CGREF1-207ENST00000440612 F8W810 466 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 MOCS3O95396 460 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 FAM163BP0C2L3 166 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 CSF2RAP15509 400 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 ABCB4P21439 1286 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 WARSP23381 471 aaKnown RBP29.72■■■□□ 2.35
CGREF1-207ENST00000440612 LMO2P25791 158 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 CDH5P33151 784 aaPredicted RBP29.72■■■□□ 2.35
CGREF1-207ENST00000440612 TIGD5Q53EQ6 642 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 NAA35Q5VZE5 725 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 URGCPQ8TCY9 931 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 CPA5Q8WXQ8 436 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 KANSL3Q9P2N6 904 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 MICAL3Q7RTP6 2002 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 A0A0A6YYK5 440 aaPredicted RBP29.72■■■□□ 2.35
CGREF1-207ENST00000440612 O00370 1275 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 GABRDO14764 452 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 HUS1O60921 280 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 ITGB1P05556 798 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 VDRP11473 427 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 CD19P15391 556 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 DNTTIP2Q5QJE6 756 aaKnown RBP29.72■■■□□ 2.35
CGREF1-207ENST00000440612 WSCD1Q658N2 575 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 MFSD5Q6N075 450 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 ADGRF2Q8IZF7 708 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 DPEP3Q9H4B8 488 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 STXBP5LQ9Y2K9 1186 aa29.72■■■□□ 2.35
CGREF1-207ENST00000440612 B3GAT3O94766 335 aa29.71■■■□□ 2.35
CGREF1-207ENST00000440612 DENND1BQ6P3S1 775 aa29.71■■■□□ 2.35
CGREF1-207ENST00000440612 DCLRE1AQ6PJP8 1040 aa29.71■■■□□ 2.35
CGREF1-207ENST00000440612 NPAS4Q8IUM7 802 aa29.71■■■□□ 2.35
CGREF1-207ENST00000440612 CRYBG2Q8N1P7 616 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms