RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 COL4A3Q01955 1670 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 GOLGA8IPA6NC78 632 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 GOLGA8JA6NMD2 632 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 HSP90AA1P07900 732 aaKnown RBP21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 HOXD13P35453 343 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 PNPLA4P41247 253 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 AMPD3Q01432 767 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 TEAD2Q15562 447 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 SLC39A12Q504Y0 691 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 STXBP4Q6ZWJ1 553 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 FRMD5Q7Z6J6 570 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 THEM5Q8N1Q8 247 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 KCNG4Q8TDN1 519 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 PSMG2Q969U7 264 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 OSBPL6Q9BZF3 934 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 PCIF1Q9H4Z3 704 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 FAM186AA6NE01 2351 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 F5P12259 2224 aa21.91■■□□□ 1.1
NCKIPSD-206ENST00000439518 KIAA0391O15091 583 aaKnown RBP21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 LRRN2O75325 713 aa21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 SOAT2O75908 522 aa21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 POLR2BP30876 1174 aaKnown RBP21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 FOXD4L6Q3SYB3 417 aaPredicted RBP21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 SCARA3Q6AZY7 606 aa21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 VITQ6UXI7 678 aa21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 FOXD4L3Q6VB84 417 aaPredicted RBP21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 EPM2AIP1Q7L775 607 aaPredicted RBP21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 ASCL5Q7RTU5 278 aa21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 DNAJB7Q7Z6W7 309 aaPredicted RBP21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 LRRTM3Q86VH5 581 aa21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 ZSCAN18Q8TBC5 510 aaPredicted RBP21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 CACTINQ8WUQ7 758 aaKnown RBP21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 DNASE1L2Q92874 299 aa21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 ZNF560Q96MR9 790 aa21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 C7orf25Q9BPX7 421 aa21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 GPR88Q9GZN0 384 aa21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 PDE11AQ9HCR9 933 aa21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 AGAP1Q9UPQ3 857 aa21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 MTF2Q9Y483 593 aaPredicted RBP21.9■■□□□ 1.1
NCKIPSD-206ENST00000439518 A0A1W2PRU2 124 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 SHISA7A6NL88 538 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 ITGB3P05106 788 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 VIPR2P41587 438 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 TUFMP49411 452 aaKnown RBP21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 ASIC1P78348 528 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 SMARCB1Q12824 385 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 PKP1Q13835 747 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 GRM2Q14416 872 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 ATL3Q6DD88 541 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 GAREM2Q75VX8 874 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 GPD1LQ8N335 351 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 LRRC52Q8N7C0 313 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 C2orf15Q8WU43 125 aaKnown RBP21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 FAM84AQ96KN4 292 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 TRMT61BQ9BVS5 477 aaKnown RBP21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 ZNF334Q9HCZ1 680 aaPredicted RBP21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 ITGA11Q9UKX5 1188 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 CACNA1IQ9P0X4 2223 aa21.89■■□□□ 1.09
NCKIPSD-206ENST00000439518 CFAP54Q96N23 3096 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 GVINP1Q7Z2Y8 2422 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 NCANO14594 1321 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 PRR23AA6NEV1 266 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 FAM170BA6NMN3 283 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 EIF3DO15371 548 aaKnown RBP eCLIP21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 POLR2DO15514 142 aaKnown RBP21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 PSMC3P17980 439 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 CD72P21854 359 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 EHHADHQ08426 723 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 TPRG1Q6ZUI0 275 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 C1orf210Q8IVY1 113 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 ZNF507Q8TCN5 953 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 BRD9Q9H8M2 597 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 MAGEF1Q9HAY2 307 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 LTB4R2Q9NPC1 389 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 TRPV5Q9NQA5 729 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 HEBP1Q9NRV9 189 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 SIX4Q9UIU6 781 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 PCDHA7Q9UN72 937 aa21.88■■□□□ 1.09
NCKIPSD-206ENST00000439518 FGF19O95750 216 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 ATF6P18850 670 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 ME1P48163 572 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 CDR1P51861 262 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 UBXN2BQ14CS0 331 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 FAM26FQ5R3K3 315 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 RESP18Q5W5W9 173 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 ITIH5Q86UX2 942 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 MFSD6LQ8IWD5 586 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 PDCL2Q8N4E4 241 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 CSGALNACT2Q8N6G5 542 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 SPPL2BQ8TCT7 592 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 DEPDC1BQ8WUY9 529 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 NELL2Q99435 816 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 SEPT5Q99719 369 aaPredicted RBP21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 MKNK1Q9BUB5 465 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 MTMR12Q9C0I1 747 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 SLITRK6Q9H5Y7 841 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 GDAP2Q9NXN4 497 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 L1RE1Q9UN81 338 aa21.87■■□□□ 1.09
NCKIPSD-206ENST00000439518 TCHHQ07283 1943 aa21.86■■□□□ 1.09
NCKIPSD-206ENST00000439518 ZNF233A6NK53 670 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms