RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 TLR9Q9NR96 1032 aa8.23□□□□□ -1.09
HCG20-208ENST00000439406 CWC15Q9P013 229 aaKnown RBP8.23□□□□□ -1.09
HCG20-208ENST00000439406 PAXBP1Q9Y5B6 917 aa8.23□□□□□ -1.09
HCG20-208ENST00000439406 PLIN4Q96Q06 1357 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 PRAMEF27A3QJZ7 478 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 PRR23AA6NEV1 266 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 SMTNL1A8MU46 457 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 FAM227AF5H4B4 570 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 HAS3O00219 553 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 DHX16O60231 1041 aaKnown RBP8.22□□□□□ -1.09
HCG20-208ENST00000439406 CNOT4O95628 575 aaKnown RBP8.22□□□□□ -1.09
HCG20-208ENST00000439406 TIMP2P16035 220 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 ATF7P17544 494 aaPredicted RBP8.22□□□□□ -1.09
HCG20-208ENST00000439406 CAPN3P20807 821 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 CALML3P27482 149 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 GBP1P32455 592 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 ICAM3P32942 547 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 VCPP55072 806 aaKnown RBP8.22□□□□□ -1.09
HCG20-208ENST00000439406 SNAP25P60880 206 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 RPS6P62753 249 aaKnown RBP8.22□□□□□ -1.09
HCG20-208ENST00000439406 LAMC2Q13753 1193 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 CCDC92Q53HC0 331 aaPredicted RBP8.22□□□□□ -1.09
HCG20-208ENST00000439406 EFHC2Q5JST6 749 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 DGKKQ5KSL6 1271 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 MCTP2Q6DN12 878 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 CYFIP1Q7L576 1253 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 SERINC5Q86VE9 423 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 TXLNBQ8N3L3 684 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 OR2C3Q8N628 320 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 SMRP1Q8NCR6 262 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 DCAF4Q8WV16 495 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 CLEC4DQ8WXI8 215 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 BHMTQ93088 406 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 HPS3Q969F9 1004 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 ACSF2Q96CM8 615 aaPredicted RBP8.22□□□□□ -1.09
HCG20-208ENST00000439406 ZBTB10Q96DT7 871 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 RCC1LQ96I51 464 aaKnown RBP8.22□□□□□ -1.09
HCG20-208ENST00000439406 IWS1Q96ST2 819 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 MAP3K14Q99558 947 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 TSPY26PQ9H489 355 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 SMOC1Q9H4F8 434 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 IGFLR1Q9H665 355 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 RETREG1Q9H6L5 497 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 TBC1D22BQ9NU19 505 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 BLOC1S4Q9NUP1 217 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 TNNQ9UQP3 1299 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 POLHQ9Y253 713 aa8.22□□□□□ -1.09
HCG20-208ENST00000439406 COL4A6Q14031 1691 aa8.21□□□□□ -1.09
HCG20-208ENST00000439406 FAM170AA1A519 330 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 NFIBO00712 420 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 GRM6O15303 877 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 TBX10O75333 385 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 PRDM1O75626 825 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 UPP2O95045 317 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 KCNH1O95259 989 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 ARIH2O95376 493 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 MMP1P03956 469 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 SNRPB2P08579 225 aaKnown RBP8.21□□□□□ -1.1
HCG20-208ENST00000439406 RHOQP17081 205 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 HOXC12P31275 282 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 CTNNB1P35222 781 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 PPM1AP35813 382 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 THPOP40225 353 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 TDO2P48775 406 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 NDUFV1P49821 464 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 GPLD1P80108 840 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 APBA1Q02410 837 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 ARHGAP1Q07960 439 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 SF1Q15637 639 aaKnown RBP8.21□□□□□ -1.1
HCG20-208ENST00000439406 STXBP2Q15833 593 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 LY6KQ17RY6 165 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 CCDC38Q502W7 563 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 TEX35Q5T0J7 233 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 CYP26C1Q6V0L0 522 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 OVCH2Q7RTZ1 564 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 GPR155Q7Z3F1 870 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 ZC3H7AQ8IWR0 971 aaKnown RBP8.21□□□□□ -1.1
HCG20-208ENST00000439406 GRAMD1CQ8IYS0 662 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 FAM26EQ8N5C1 309 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 EFHBQ8N7U6 833 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 CHST14Q8NCH0 376 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 ZNF397Q8NF99 534 aaPredicted RBP8.21□□□□□ -1.1
HCG20-208ENST00000439406 PPTC7Q8NI37 304 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 HDAC2Q92769 488 aaKnown RBP8.21□□□□□ -1.1
HCG20-208ENST00000439406 P2RX5Q93086 422 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 NKD2Q969F2 451 aaPredicted RBP8.21□□□□□ -1.1
HCG20-208ENST00000439406 SEC62Q99442 399 aaKnown RBP8.21□□□□□ -1.1
HCG20-208ENST00000439406 ALG1Q9BT22 464 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 APOL5Q9BWW9 433 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 SLC26A6Q9BXS9 759 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 IFIH1Q9BYX4 1025 aaKnown RBP8.21□□□□□ -1.1
HCG20-208ENST00000439406 NACAP1Q9BZK3 213 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 KRT82Q9NSB4 513 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 LMBRD1Q9NUN5 540 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 RBM28Q9NW13 759 aaKnown RBP8.21□□□□□ -1.1
HCG20-208ENST00000439406 FAM53CQ9NYF3 392 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 CLEC1BQ9P126 229 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 FEZ2Q9UHY8 353 aaPredicted RBP8.21□□□□□ -1.1
HCG20-208ENST00000439406 STX8Q9UNK0 236 aa8.21□□□□□ -1.1
HCG20-208ENST00000439406 PLAGL2Q9UPG8 496 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms