RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ARMCX1Q9P291 453 aa14.32□□□□□ -0.12
PCNX3-202ENST00000439247 DNPEPQ9ULA0 475 aa14.32□□□□□ -0.12
PCNX3-202ENST00000439247 ACTL7BQ9Y614 415 aa14.32□□□□□ -0.12
PCNX3-202ENST00000439247 RTN3O95197 1032 aaPredicted RBP14.32□□□□□ -0.12
PCNX3-202ENST00000439247 MUTP22033 750 aa14.32□□□□□ -0.12
PCNX3-202ENST00000439247 KLRC2P26717 231 aa14.32□□□□□ -0.12
PCNX3-202ENST00000439247 GMPSP49915 693 aaPredicted RBP14.32□□□□□ -0.12
PCNX3-202ENST00000439247 CACNA2D1P54289 1103 aa14.32□□□□□ -0.12
PCNX3-202ENST00000439247 JAG1P78504 1218 aa14.32□□□□□ -0.12
PCNX3-202ENST00000439247 SGSM1Q2NKQ1 1148 aa14.32□□□□□ -0.12
PCNX3-202ENST00000439247 ZFYVE27Q5T4F4 411 aa14.32□□□□□ -0.12
PCNX3-202ENST00000439247 SAMD7Q7Z3H4 446 aa14.32□□□□□ -0.12
PCNX3-202ENST00000439247 HELQQ8TDG4 1101 aa14.32□□□□□ -0.12
PCNX3-202ENST00000439247 IFT43Q96FT9 208 aa14.32□□□□□ -0.12
PCNX3-202ENST00000439247 STRA6Q9BX79 667 aa14.32□□□□□ -0.12
PCNX3-202ENST00000439247 GSC2O15499 205 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 TYROBPO43914 113 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 RFX1P22670 979 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 AMPD1P23109 780 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 SERPINB3P29508 390 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 NR1H3Q13133 447 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 MDH1BQ5I0G3 518 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 LRRC74BQ6ZQY2 392 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 FBXO27Q8NI29 283 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 MKL1Q969V6 931 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 TRIM4Q9C037 500 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 TUFT1Q9NNX1 390 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 STOML1Q9UBI4 398 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 ATRNL1Q5VV63 1379 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 WNT10BO00744 389 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 PRPF4O43172 522 aaKnown RBP eCLIP14.31□□□□□ -0.121e-8■■□□□ 11.4
PCNX3-202ENST00000439247 NDUFB10O96000 172 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 CNGA1P29973 690 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 RASSF2P50749 326 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 PADI6Q6TGC4 694 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 STXBP4Q6ZWJ1 553 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 CCDC89Q8N998 374 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 XXYLT1Q8NBI6 393 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 AGBL3Q8NEM8 1001 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 PLVAPQ9BX97 442 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 IDI2Q9BXS1 227 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 OSBPL8Q9BZF1 889 aa14.31□□□□□ -0.12
PCNX3-202ENST00000439247 SLC16A4O15374 487 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 GYG2O15488 501 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 SSTR1P30872 391 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 SERPINB4P48594 390 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 CAV1Q03135 178 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 GPS1Q13098 491 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 CLEC16AQ2KHT3 1053 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 SLC9A9Q8IVB4 645 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 ZCCHC9Q8N567 271 aaKnown RBP14.3□□□□□ -0.12
PCNX3-202ENST00000439247 IRAK4Q9NWZ3 460 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 ZNF70Q9UC06 446 aaPredicted RBP14.3□□□□□ -0.12
PCNX3-202ENST00000439247 SCOCQ9UIL1 159 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.3□□□□□ -0.12
PCNX3-202ENST00000439247 C2CD2LO14523 706 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 TRAFD1O14545 582 aaPredicted RBP14.3□□□□□ -0.12
PCNX3-202ENST00000439247 ARSEP51690 589 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 MFAP3P55082 362 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 THOC5Q13769 683 aaKnown RBP14.3□□□□□ -0.12
PCNX3-202ENST00000439247 SLC45A4Q5BKX6 768 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 LMBRD2Q68DH5 695 aaPredicted RBP14.3□□□□□ -0.12
PCNX3-202ENST00000439247 IRGCQ6NXR0 463 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 CCDC174Q6PII3 467 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 FGD4Q96M96 766 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 CFAP57Q96MR6 1250 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 NACC1Q96RE7 527 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 BTBD10Q9BSF8 475 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 OCEL1Q9H607 264 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 TLE6Q9H808 572 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 MYOZ2Q9NPC6 264 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 KRT82Q9NSB4 513 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 ZNF148Q9UQR1 794 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 PIK3CDO00329 1044 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 RNF8O76064 485 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 PSMG1O95456 288 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 ATF7P17544 494 aaPredicted RBP14.3□□□□□ -0.12
PCNX3-202ENST00000439247 CETN2P41208 172 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 MCOLN2Q8IZK6 566 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 SHKBP1Q8TBC3 707 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 TCP10LQ8TDR4 215 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 CLPTM1LQ96KA5 538 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 EPAS1Q99814 870 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 ZNF577Q9BSK1 485 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 SEL1LQ9UBV2 794 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 LRCH1Q9Y2L9 728 aa14.3□□□□□ -0.12
PCNX3-202ENST00000439247 SIPA1L1O43166 1804 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 IFNB1P01574 187 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 HLA-DOAP06340 250 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 PYGLP06737 847 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 GCLCP48506 637 aaPredicted RBP14.29□□□□□ -0.12
PCNX3-202ENST00000439247 PDIA2Q13087 525 aaKnown RBP14.29□□□□□ -0.12
PCNX3-202ENST00000439247 MTHFD1LQ6UB35 978 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 MCUR1Q96AQ8 359 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 PTCD3Q96EY7 689 aaKnown RBP14.29□□□□□ -0.12
PCNX3-202ENST00000439247 C11orf70Q9BRQ4 267 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 VCXQ9H320 206 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 TAS2R1Q9NYW7 299 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 HAUS5O94927 633 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms