RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 MAGEB2O15479 319 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 TOP3BO95985 862 aaKnown RBP14.1□□□□□ -0.15
ACTN1-204ENST00000438964 HARSP12081 509 aaKnown RBP14.1□□□□□ -0.15
ACTN1-204ENST00000438964 GRIA2P42262 883 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 EPHB1P54762 984 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 USP46P62068 366 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 OCRLQ01968 901 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 C1orf146Q5VVC0 180 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 RHPN2Q8IUC4 686 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 PANX3Q96QZ0 392 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 SPATA16Q9BXB7 569 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 KCNK13Q9HB14 408 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 GALNT8Q9NY28 637 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 CYP3A7-CYP3A51PA0A087WV96 503 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 TCRBV7S3A2A0A539 114 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 DCAF8L1A6NGE4 600 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 EIF3DO15371 548 aaKnown RBP eCLIP14.09□□□□□ -0.15
ACTN1-204ENST00000438964 ANPEPP15144 967 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 RPL7AP62424 266 aaKnown RBP14.09□□□□□ -0.15
ACTN1-204ENST00000438964 RASA2Q15283 850 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 FNBP1LQ5T0N5 605 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 PAOXQ6QHF9 649 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 C3orf62Q6ZUJ4 267 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 FBXO11Q86XK2 927 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 ZCCHC9Q8N567 271 aaKnown RBP14.09□□□□□ -0.15
ACTN1-204ENST00000438964 ZFAND2BQ8WV99 257 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 SNRNP27Q8WVK2 155 aaKnown RBP14.09□□□□□ -0.15
ACTN1-204ENST00000438964 ANKRD27Q96NW4 1050 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 PAFAH2Q99487 392 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-204ENST00000438964 STX18Q9P2W9 335 aaKnown RBP14.09□□□□□ -0.15
ACTN1-204ENST00000438964 ARHGAP42A6NI28 874 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 CYB561D2O14569 222 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 ECE2O60344 883 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 PDE5AO76074 875 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 CYP3A7P24462 503 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 PEX3P56589 373 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 BTKQ06187 659 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 GABPAQ06546 454 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 UBAP2LQ14157 1087 aaKnown RBP14.09□□□□□ -0.15
ACTN1-204ENST00000438964 DOK7Q18PE1 504 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 SMTNL2Q2TAL5 461 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.09□□□□□ -0.15
ACTN1-204ENST00000438964 SCARA3Q6AZY7 606 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 ACAD10Q6JQN1 1059 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 MFSD7Q6UXD7 560 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 ITFG2Q969R8 447 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 ACAP3Q96P50 834 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 ASCC2Q9H1I8 757 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-204ENST00000438964 UNC45AQ9H3U1 944 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 CYP4F11Q9HBI6 524 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 F5H6K3 240 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 PLSCR1O15162 318 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 GLRA2P23416 452 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 KLRC2P26717 231 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 GDF10P55107 478 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 TMEM62Q0P6H9 643 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 CDC16Q13042 620 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 PADI6Q6TGC4 694 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 ZCCHC23Q6ZST2 131 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 NLRX1Q86UT6 975 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 ABTB1Q969K4 478 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-204ENST00000438964 AMNQ9BXJ7 453 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 ARHGEF4Q9NR80 690 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 CHMP2BQ9UQN3 213 aa14.09□□□□□ -0.15
ACTN1-204ENST00000438964 IGKV6D-41A0A0C4DH26 115 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 PRPF4O43172 522 aaKnown RBP eCLIP14.08□□□□□ -0.168e-7■■■□□ 17.4
ACTN1-204ENST00000438964 CREB3O43889 395 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 GRIN3BO60391 1043 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 TCEA3O75764 348 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 LMNAP02545 664 aaKnown RBP14.08□□□□□ -0.16
ACTN1-204ENST00000438964 ADSSP30520 456 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 CLEC4GQ6UXB4 293 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 RGS9BPQ6ZS82 235 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 OPTNQ96CV9 577 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 TIPINQ9BVW5 301 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 SLC13A1Q9BZW2 595 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 PSMC3IPQ9P2W1 217 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-204ENST00000438964 UVRAGQ9P2Y5 699 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 CLUHO75153 1309 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 TRAFD1O14545 582 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-204ENST00000438964 GZMAP12544 262 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 MFAP3P55082 362 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 SLC25A3Q00325 362 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 DSG1Q02413 1049 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 KLF1Q13351 362 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-204ENST00000438964 LIN52Q52LA3 116 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 ARID3BQ8IVW6 561 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-204ENST00000438964 XXYLT1Q8NBI6 393 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 PYROXD1Q8WU10 500 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 CRYGNQ8WXF5 182 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 OXNAD1Q96HP4 312 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-204ENST00000438964 SERAC1Q96JX3 654 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 TRAPPC9Q96Q05 1148 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 ECSITQ9BQ95 431 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 TLE6Q9H808 572 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 POLLQ9UGP5 575 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 PCDHGB4Q9UN71 923 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 PCDHGB5Q9Y5G0 923 aa14.08□□□□□ -0.16
ACTN1-204ENST00000438964 SLC4A7Q9Y6M7 1214 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms