RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 SMC1AQ14683 1233 aaKnown RBP19.67■□□□□ 0.74
HDAC6-208ENST00000438518 PTPROQ16827 1216 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 RTP2Q5QGT7 225 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 KIAA0319Q5VV43 1072 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 WSCD1Q658N2 575 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 DPY19L2P1Q6NXN4 242 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 CEP57Q86XR8 500 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 ACBD6Q9BR61 282 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 SNX25Q9H3E2 840 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 ALG13Q9NP73 1137 aaKnown RBP19.67■□□□□ 0.74
HDAC6-208ENST00000438518 FAM207AQ9NSI2 230 aaPredicted RBP19.67■□□□□ 0.74
HDAC6-208ENST00000438518 CEP72Q9P209 647 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 FNIP2Q9P278 1114 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 DNAJC12Q9UKB3 198 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 BARX2Q9UMQ3 279 aaPredicted RBP19.67■□□□□ 0.74
HDAC6-208ENST00000438518 OR6C75A6NL08 312 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 GSE1Q14687 1217 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 ZNF697Q5TEC3 545 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 SPECC1LQ69YQ0 1117 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 SCARA5Q6ZMJ2 495 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 TMC7Q7Z402 723 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 ARHGEF19Q8IW93 802 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 LNX1Q8TBB1 728 aaPredicted RBP19.66■□□□□ 0.74
HDAC6-208ENST00000438518 KBTBD7Q8WVZ9 684 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 TNIP3Q96KP6 325 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 TCF25Q9BQ70 676 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 NAA15Q9BXJ9 866 aaKnown RBP19.66■□□□□ 0.74
HDAC6-208ENST00000438518 GANQ9H2C0 597 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 SMYD3Q9H7B4 428 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 ENTPD7Q9NQZ7 604 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 CISHQ9NSE2 258 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 DDX43Q9NXZ2 648 aaKnown RBP19.66■□□□□ 0.74
HDAC6-208ENST00000438518 LMCD1Q9NZU5 365 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 MTRRQ9UBK8 725 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 MYO6Q9UM54 1294 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 STXBP5LQ9Y2K9 1186 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 LAMA3Q16787 3333 aa19.66■□□□□ 0.74
HDAC6-208ENST00000438518 A0A1W2PQJ5 194 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 FSCN2O14926 492 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 GRM6O15303 877 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 C1RP00736 705 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 GNL1P36915 607 aaPredicted RBP19.65■□□□□ 0.74
HDAC6-208ENST00000438518 ZNF75DP51815 510 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 PTPN14Q15678 1187 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 PSMD5Q16401 504 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 IQCEQ6IPM2 695 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 RRAGAQ7L523 313 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 TAS1R1Q7RTX1 841 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 CACNA2D4Q7Z3S7 1137 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 SPRED2Q7Z698 418 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 VSTM4Q8IW00 320 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 UBR7Q8N806 425 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 OR6B3Q8NGW1 331 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 RIN2Q8WYP3 895 aaPredicted RBP19.65■□□□□ 0.74
HDAC6-208ENST00000438518 SHC3Q92529 594 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 MRPL45Q9BRJ2 306 aaKnown RBP19.65■□□□□ 0.74
HDAC6-208ENST00000438518 STK33Q9BYT3 514 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 SDCBP2Q9H190 292 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 RXFP1Q9HBX9 757 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.65■□□□□ 0.74
HDAC6-208ENST00000438518 CDH9Q9ULB4 789 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 CNTN6Q9UQ52 1028 aa19.65■□□□□ 0.74
HDAC6-208ENST00000438518 TIMM13Q9Y5L4 95 aaPredicted RBP19.65■□□□□ 0.74
HDAC6-208ENST00000438518 A8MXQ7 604 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 AP5Z1O43299 807 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 TBC1D4O60343 1298 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 LILRB3O75022 631 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 CILPO75339 1184 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 NOL4O94818 638 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 WEE2P0C1S8 567 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 KLK7P49862 253 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 CDH8P55286 799 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 POLR2FP61218 127 aaKnown RBP19.64■□□□□ 0.73
HDAC6-208ENST00000438518 TSPY1Q01534 308 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 SMARCB1Q12824 385 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 MAPRE1Q15691 268 aaKnown RBP19.64■□□□□ 0.73
HDAC6-208ENST00000438518 CTXN3Q4LDR2 81 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 SLC8B1Q6J4K2 584 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 KREMEN1Q96MU8 473 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 ARID3AQ99856 593 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 NT5C1AQ9BXI3 368 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 EMILIN2Q9BXX0 1053 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 TTYH3Q9C0H2 523 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 NUCKS1Q9H1E3 243 aaKnown RBP19.64■□□□□ 0.73
HDAC6-208ENST00000438518 CERS4Q9HA82 394 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 FHOD1Q9Y613 1164 aa19.64■□□□□ 0.73
HDAC6-208ENST00000438518 TPM1P09493 284 aa19.63■□□□□ 0.73
HDAC6-208ENST00000438518 CD58P19256 250 aa19.63■□□□□ 0.73
HDAC6-208ENST00000438518 ACO1P21399 889 aaKnown RBP19.63■□□□□ 0.73
HDAC6-208ENST00000438518 CDC25BP30305 580 aa19.63■□□□□ 0.73
HDAC6-208ENST00000438518 RAP1GAPP47736 663 aa19.63■□□□□ 0.73
HDAC6-208ENST00000438518 NDUFV1P49821 464 aa19.63■□□□□ 0.73
HDAC6-208ENST00000438518 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.63■□□□□ 0.73
HDAC6-208ENST00000438518 DCP1BQ8IZD4 617 aaKnown RBP19.63■□□□□ 0.73
HDAC6-208ENST00000438518 MRPL43Q8N983 215 aaKnown RBP19.63■□□□□ 0.73
HDAC6-208ENST00000438518 ZNF397Q8NF99 534 aaPredicted RBP19.63■□□□□ 0.73
HDAC6-208ENST00000438518 PPP2R3CQ969Q6 453 aa19.63■□□□□ 0.73
HDAC6-208ENST00000438518 MRPL38Q96DV4 380 aaKnown RBP19.63■□□□□ 0.73
HDAC6-208ENST00000438518 SPAG5Q96R06 1193 aa19.63■□□□□ 0.73
HDAC6-208ENST00000438518 KIAA1257Q9ULG3 409 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms