RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 POSTNQ15063 836 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 PTPN21Q16825 1174 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 CTXN3Q4LDR2 81 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 TMEM31Q5JXX7 168 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 LMBRD2Q68DH5 695 aaPredicted RBP9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 ARMCX5Q6P1M9 558 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 PDXDC1Q6P996 788 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 CBWD2Q8IUF1 395 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 NELFCDQ8IXH7 590 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 ZDHHC14Q8IZN3 488 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 SYCP3Q8IZU3 236 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 C1orf127Q8N9H9 656 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 TDRD5Q8NAT2 981 aaKnown RBP9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 PLPP7Q8NBV4 271 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 ST13P5Q8NFI4 369 aaPredicted RBP9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 BEST2Q8NFU1 509 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 ASIC4Q96FT7 647 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 SENP8Q96LD8 212 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 TMEM209Q96SK2 561 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 C1QTNF1Q9BXJ1 281 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 LRRC27Q9C0I9 530 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 CRISPLD1Q9H336 500 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 PDE11AQ9HCR9 933 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 SLC39A2Q9NP94 309 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 DPP3Q9NY33 737 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 MYH10P35580 1976 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 F5P12259 2224 aa9.24□□□□□ -0.93
HERPUD2-206ENST00000438224 NUP210Q8TEM1 1887 aaPredicted RBP9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 KIF26AQ9ULI4 1882 aaPredicted RBP9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 COL4A2P08572 1712 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 PVALEFA0A1B0GWK0 134 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 CLIC2O15247 247 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 XPOTO43592 962 aaKnown RBP9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 EXTL3O43909 919 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 OAZ2O95190 189 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 IL18RAPO95256 599 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 ABL1P00519 1130 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 HNRNPA1P09651 372 aaKnown RBP eCLIP9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 HOXB3P14651 431 aaPredicted RBP9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 HOXA9P31269 272 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 CDR1P51861 262 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 AMPD3Q01432 767 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 POU5F1Q01860 360 aaKnown RBP9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 BECN1Q14457 450 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 BMT2Q1RMZ1 405 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 KMT5BQ4FZB7 885 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 PPM1LQ5SGD2 360 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 LIN9Q5TKA1 542 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 ZNF280DQ6N043 979 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 RNF19BQ6ZMZ0 732 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 HFE2Q6ZVN8 426 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 GRASPQ7Z6J2 395 aaPredicted RBP9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 GPD1LQ8N335 351 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 TTC9BQ8N6N2 239 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 FSIP1Q8NA03 581 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 OR5B17Q8NGF7 314 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 OR10T2Q8NGX3 314 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 ZNF461Q8TAF7 563 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 PLEKHO2Q8TD55 490 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 NOC3LQ8WTT2 800 aaKnown RBP9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 RSAD2Q8WXG1 361 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 EDAQ92838 391 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 TSPAN18Q96SJ8 248 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 RTP3Q9BQQ7 232 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 KRTAP3-3Q9BYR6 98 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 TMEM206Q9H813 350 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 AGPAT3Q9NRZ7 376 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 RBAKQ9NYW8 714 aaPredicted RBP9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 HSPBP1Q9NZL4 362 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 DNMT3BQ9UBC3 853 aaKnown RBP9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 SIX4Q9UIU6 781 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 NR2E1Q9Y466 385 aa9.23□□□□□ -0.93
HERPUD2-206ENST00000438224 A0A1W2PQ27 194 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 A0A1W2PQ64 194 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 A0A1W2PQD8 194 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 ARHGEF37A1IGU5 675 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 H7C4K7 107 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 PDGFBP01127 241 aaPredicted RBP9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 ITGB3P05106 788 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 CYP11A1P05108 521 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 ATF2P15336 505 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 POLR2BP30876 1174 aaKnown RBP9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 GBP2P32456 591 aaPredicted RBP9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 SYKP43405 635 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 CYP2J2P51589 502 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 TFAMQ00059 246 aaKnown RBP9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 YWHAHQ04917 246 aaPredicted RBP9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 CCDC142Q17RM4 750 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 SLC5A9Q2M3M2 681 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 EML3Q32P44 896 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 CYP26C1Q6V0L0 522 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 DSTYKQ6XUX3 929 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 TRIM67Q6ZTA4 783 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 GET4Q7L5D6 327 aaPredicted RBP9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 TCEAL8Q8IYN2 117 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 CEP57L1Q8IYX8 460 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 APPL2Q8NEU8 664 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 ITFG1Q8TB96 612 aa9.22□□□□□ -0.93
HERPUD2-206ENST00000438224 UBXN4Q92575 508 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms