RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 HHIPQ96QV1 700 aa16.11■□□□□ 0.17
HDAC8-213ENST00000436675 SEPT5Q99719 369 aaPredicted RBP16.11■□□□□ 0.17
HDAC8-213ENST00000436675 LSM14BQ9BX40 385 aaKnown RBP16.11■□□□□ 0.17
HDAC8-213ENST00000436675 HAPLN2Q9GZV7 340 aa16.11■□□□□ 0.17
HDAC8-213ENST00000436675 DNM3Q9UQ16 869 aa16.11■□□□□ 0.17
HDAC8-213ENST00000436675 ASB3Q9Y575 518 aa16.11■□□□□ 0.17
HDAC8-213ENST00000436675 DENND4CQ5VZ89 1909 aa16.11■□□□□ 0.17
HDAC8-213ENST00000436675 ANKRD11Q6UB99 2663 aaPredicted RBP16.11■□□□□ 0.17
HDAC8-213ENST00000436675 ABCA7Q8IZY2 2146 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 GIPC1O14908 333 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 TOM1L1O75674 476 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 U2AF2P26368 475 aaKnown RBP eCLIP16.1■□□□□ 0.17
HDAC8-213ENST00000436675 CDC25AP30304 524 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 TNFSF9P41273 254 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 MCM2P49736 904 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 ST3GAL1Q11201 340 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 COL9A2Q14055 689 aaPredicted RBP16.1■□□□□ 0.17
HDAC8-213ENST00000436675 ZRSR1Q15695 479 aaKnown RBP16.1■□□□□ 0.17
HDAC8-213ENST00000436675 PLA2G2CQ5R387 149 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 TRIM68Q6AZZ1 485 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 RINT1Q6NUQ1 792 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 KCNK18Q7Z418 384 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 C4orf32Q8N8J7 132 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 EBF3Q9H4W6 596 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 TASP1Q9H6P5 420 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 SH2B1Q9NRF2 756 aaPredicted RBP16.1■□□□□ 0.17
HDAC8-213ENST00000436675 THG1LQ9NWX6 298 aaKnown RBP16.1■□□□□ 0.17
HDAC8-213ENST00000436675 OBP2AQ9NY56 170 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 NUP205Q92621 2012 aa16.1■□□□□ 0.17
HDAC8-213ENST00000436675 LACTBL1A8MY62 500 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 DCLK1O15075 740 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 CLDN3O15551 220 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 RNF40O75150 1001 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 FGF19O95750 216 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 EGFP01133 1207 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 SPINK2P20155 84 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 LRPAP1P30533 357 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 GRSF1Q12849 480 aaKnown RBP eCLIP16.09■□□□□ 0.17
HDAC8-213ENST00000436675 FOXC1Q12948 553 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 MYBPC2Q14324 1141 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 MGAT5BQ3V5L5 792 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 PLK5Q496M5 336 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 SLC39A12Q504Y0 691 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 ARMCX5Q6P1M9 558 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 C1orf186Q6ZWK4 172 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 ITIH5Q86UX2 942 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 FAM212AQ96EL1 285 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 BICD1Q96G01 975 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 C8orf76Q96K31 380 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 GCNAQ96QF7 691 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 SLC46A2Q9BY10 475 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 OXCT2Q9BYC2 517 aaPredicted RBP16.09■□□□□ 0.17
HDAC8-213ENST00000436675 HPS4Q9NQG7 708 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 VPS45Q9NRW7 570 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 UBQLN1Q9UMX0 589 aaKnown RBP16.09■□□□□ 0.17
HDAC8-213ENST00000436675 TCHHQ07283 1943 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 SCN1AP35498 2009 aa16.09■□□□□ 0.17
HDAC8-213ENST00000436675 TSC2P49815 1807 aa16.08■□□□□ 0.17
HDAC8-213ENST00000436675 THADAQ6YHU6 1953 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 TTC26A0AVF1 554 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 OTOL1A6NHN0 477 aaPredicted RBP16.08■□□□□ 0.16
HDAC8-213ENST00000436675 C4orf47A7E2U8 309 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 CLTAP09496 248 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 HOXB3P14651 431 aaPredicted RBP16.08■□□□□ 0.16
HDAC8-213ENST00000436675 AARSP49588 968 aaKnown RBP eCLIP16.08■□□□□ 0.163e-6■■■■■ 61.8
HDAC8-213ENST00000436675 NOVA1P51513 510 aaKnown RBP16.08■□□□□ 0.16
HDAC8-213ENST00000436675 CREB5Q02930 508 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 PPP2R3AQ06190 1150 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 ORC2Q13416 577 aaPredicted RBP16.08■□□□□ 0.16
HDAC8-213ENST00000436675 RUNX3Q13761 415 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 GNL2Q13823 731 aaKnown RBP16.08■□□□□ 0.16
HDAC8-213ENST00000436675 ZBTB6Q15916 424 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 TAF12Q16514 161 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 TMEM196Q5HYL7 178 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 NAIF1Q69YI7 327 aaPredicted RBP16.08■□□□□ 0.16
HDAC8-213ENST00000436675 TMEM161BQ8NDZ6 487 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 OR10T2Q8NGX3 314 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 SENP8Q96LD8 212 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 EDEM2Q9BV94 578 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 DUSP15Q9H1R2 295 aaPredicted RBP16.08■□□□□ 0.16
HDAC8-213ENST00000436675 IL21Q9HBE4 155 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 FBRSL1Q9HCM7 1045 aaKnown RBP16.08■□□□□ 0.16
HDAC8-213ENST00000436675 ZMIZ1Q9ULJ6 1067 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 CCL26Q9Y258 94 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 INVSQ9Y283 1065 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 SPEGQ15772 3267 aa16.08■□□□□ 0.16
HDAC8-213ENST00000436675 DSPP15924 2871 aaKnown RBP16.08■□□□□ 0.16
HDAC8-213ENST00000436675 CCDC163A0A0D9SF12 145 aa16.07■□□□□ 0.16
HDAC8-213ENST00000436675 ATG13O75143 517 aa16.07■□□□□ 0.16
HDAC8-213ENST00000436675 MAPTP10636 758 aaKnown RBP16.07■□□□□ 0.16
HDAC8-213ENST00000436675 ODC1P11926 461 aa16.07■□□□□ 0.16
HDAC8-213ENST00000436675 ARSAP15289 507 aa16.07■□□□□ 0.16
HDAC8-213ENST00000436675 ATF6P18850 670 aa16.07■□□□□ 0.16
HDAC8-213ENST00000436675 TYMPP19971 482 aa16.07■□□□□ 0.16
HDAC8-213ENST00000436675 NMT1P30419 496 aaKnown RBP16.07■□□□□ 0.16
HDAC8-213ENST00000436675 NEK4P51957 841 aa16.07■□□□□ 0.16
HDAC8-213ENST00000436675 MCL1Q07820 350 aa16.07■□□□□ 0.16
HDAC8-213ENST00000436675 PDIA5Q14554 519 aa16.07■□□□□ 0.16
HDAC8-213ENST00000436675 VEPH1Q14D04 833 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms