RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 DEFB124Q8NES8 71 aa16.35■□□□□ 0.21
NELFE-204ENST00000436289 OXER1Q8TDS5 423 aa16.35■□□□□ 0.21
NELFE-204ENST00000436289 PGLYRP2Q96PD5 576 aa16.35■□□□□ 0.21
NELFE-204ENST00000436289 P2RY13Q9BPV8 354 aa16.35■□□□□ 0.21
NELFE-204ENST00000436289 NUSAP1Q9BXS6 441 aaKnown RBP16.35■□□□□ 0.21
NELFE-204ENST00000436289 KIF9Q9HAQ2 790 aa16.35■□□□□ 0.21
NELFE-204ENST00000436289 ZSWIM6Q9HCJ5 1215 aa16.35■□□□□ 0.21
NELFE-204ENST00000436289 STK36Q9NRP7 1315 aa16.35■□□□□ 0.21
NELFE-204ENST00000436289 DCLK1O15075 740 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 HYAL3O43820 417 aaPredicted RBP16.34■□□□□ 0.21
NELFE-204ENST00000436289 PRAMEF12O95522 483 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 EGFP01133 1207 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 DDX6P26196 483 aaKnown RBP eCLIP16.34■□□□□ 0.21
NELFE-204ENST00000436289 KRT2P35908 639 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 AVPR1AP37288 418 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 GALK1P51570 392 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 DGKEP52429 567 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 IRX4P78413 519 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 DMC1Q14565 340 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 PDGFRLQ15198 375 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 TAF12Q16514 161 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 UAP1L1Q3KQV9 507 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 CMTM8Q8IZV2 173 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 CEP120Q8N960 986 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 C18orf25Q96B23 403 aaPredicted RBP16.34■□□□□ 0.21
NELFE-204ENST00000436289 PLEKHA5Q9HAU0 1116 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 KCNG1Q9UIX4 513 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 RBM19Q9Y4C8 960 aaKnown RBP16.34■□□□□ 0.21
NELFE-204ENST00000436289 CYP46A1Q9Y6A2 500 aa16.34■□□□□ 0.21
NELFE-204ENST00000436289 ITPR1Q14643 2758 aa16.33■□□□□ 0.21
NELFE-204ENST00000436289 MEFVO15553 781 aaPredicted RBP16.33■□□□□ 0.2
NELFE-204ENST00000436289 VNN2O95498 520 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 TYMPP19971 482 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 LRPAP1P30533 357 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 BFSP1Q12934 665 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 SOWAHCQ53LP3 525 aaPredicted RBP16.33■□□□□ 0.2
NELFE-204ENST00000436289 EARS2Q5JPH6 523 aaKnown RBP16.33■□□□□ 0.2
NELFE-204ENST00000436289 TSTD1Q8NFU3 115 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 RPLP0P6Q8NHW5 317 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 TSPAN18Q96SJ8 248 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 KIFC3Q9BVG8 833 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 SLC46A2Q9BY10 475 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 CRISPLD1Q9H336 500 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 EBF3Q9H4W6 596 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 HPS4Q9NQG7 708 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 TBX20Q9UMR3 447 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 SLC27A5Q9Y2P5 690 aa16.33■□□□□ 0.2
NELFE-204ENST00000436289 NUP210Q8TEM1 1887 aaPredicted RBP16.33■□□□□ 0.2
NELFE-204ENST00000436289 ASCC3Q8N3C0 2202 aaKnown RBP16.33■□□□□ 0.2
NELFE-204ENST00000436289 MTMR11A4FU01 709 aa16.32■□□□□ 0.2
NELFE-204ENST00000436289 MED24O75448 989 aa16.32■□□□□ 0.2
NELFE-204ENST00000436289 CYP3A5P20815 502 aa16.32■□□□□ 0.2
NELFE-204ENST00000436289 PROZP22891 400 aa16.32■□□□□ 0.2
NELFE-204ENST00000436289 AARSP49588 968 aaKnown RBP eCLIP16.32■□□□□ 0.2
NELFE-204ENST00000436289 SMARCB1Q12824 385 aa16.32■□□□□ 0.2
NELFE-204ENST00000436289 ZNF423Q2M1K9 1284 aa16.32■□□□□ 0.2
NELFE-204ENST00000436289 SPDYCQ5MJ68 293 aa16.32■□□□□ 0.2
NELFE-204ENST00000436289 OVOS1Q6IE37 1185 aa16.32■□□□□ 0.2
NELFE-204ENST00000436289 MPZL3Q6UWV2 235 aa16.32■□□□□ 0.2
NELFE-204ENST00000436289 ATAD1Q8NBU5 361 aa16.32■□□□□ 0.2
NELFE-204ENST00000436289 TDP1Q9NUW8 608 aa16.32■□□□□ 0.2
NELFE-204ENST00000436289 GPSM3Q9Y4H4 160 aa16.32■□□□□ 0.2
NELFE-204ENST00000436289 ABCA7Q8IZY2 2146 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 NUP205Q92621 2012 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 EML5Q05BV3 1969 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 WDFY3Q8IZQ1 3526 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 TNFRSF10BO14763 440 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 EPB41L2O43491 1005 aaKnown RBP16.31■□□□□ 0.2
NELFE-204ENST00000436289 XPOTO43592 962 aaKnown RBP16.31■□□□□ 0.2
NELFE-204ENST00000436289 REC8O95072 547 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 OR4Q2P0C623 313 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 SIM1P81133 766 aaPredicted RBP16.31■□□□□ 0.2
NELFE-204ENST00000436289 STK3Q13188 491 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 LMBRD2Q68DH5 695 aaPredicted RBP16.31■□□□□ 0.2
NELFE-204ENST00000436289 KIAA1211LQ6NV74 962 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 DSTYKQ6XUX3 929 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 RASSF3Q86WH2 238 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 CPA6Q8N4T0 437 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 C2orf15Q8WU43 125 aaKnown RBP16.31■□□□□ 0.2
NELFE-204ENST00000436289 PIGKQ92643 395 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 TNFRSF25Q93038 417 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 CNOT6LQ96LI5 555 aaKnown RBP16.31■□□□□ 0.2
NELFE-204ENST00000436289 C17orf75Q9HAS0 396 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 KLK13Q9UKR3 277 aa16.31■□□□□ 0.2
NELFE-204ENST00000436289 ATG2BQ96BY7 2078 aa16.3■□□□□ 0.2
NELFE-204ENST00000436289 HELZ2Q9BYK8 2649 aaKnown RBP16.3■□□□□ 0.2
NELFE-204ENST00000436289 OTOL1A6NHN0 477 aaPredicted RBP16.3■□□□□ 0.2
NELFE-204ENST00000436289 EIF4E1BA6NMX2 242 aaKnown RBP16.3■□□□□ 0.2
NELFE-204ENST00000436289 CCDC169A6NNP5 214 aa16.3■□□□□ 0.2
NELFE-204ENST00000436289 ALDH1A2O94788 518 aa16.3■□□□□ 0.2
NELFE-204ENST00000436289 CAPNS1P04632 268 aa16.3■□□□□ 0.2
NELFE-204ENST00000436289 GJA4P35212 333 aa16.3■□□□□ 0.2
NELFE-204ENST00000436289 HOXD12P35452 270 aa16.3■□□□□ 0.2
NELFE-204ENST00000436289 DHPSP49366 369 aaPredicted RBP16.3■□□□□ 0.2
NELFE-204ENST00000436289 NR1H3Q13133 447 aa16.3■□□□□ 0.2
NELFE-204ENST00000436289 SEMA3BQ13214 749 aa16.3■□□□□ 0.2
NELFE-204ENST00000436289 NR5A1Q13285 461 aa16.3■□□□□ 0.2
NELFE-204ENST00000436289 DMP1Q13316 513 aaPredicted RBP16.3■□□□□ 0.2
NELFE-204ENST00000436289 BYSLQ13895 437 aaKnown RBP16.3■□□□□ 0.2
NELFE-204ENST00000436289 ZNF268Q14587 947 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms