RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 CDK7P50613 346 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 ALDH18A1P54886 795 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 CDC16Q13042 620 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 MAP7Q14244 749 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 SLFN13Q68D06 897 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 CLEC4GQ6UXB4 293 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 SESTD1Q86VW0 696 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 PALM2Q8IXS6 379 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 PLEKHO2Q8TD55 490 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 MTBPQ96DY7 904 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 FIZ1Q96SL8 496 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 C11orf70Q9BRQ4 267 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 POLR3CQ9BUI4 534 aaPredicted RBP12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 CD209Q9NNX6 404 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 TOPORSQ9NS56 1045 aaPredicted RBP12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 CCDC195A0A1B0GUA6 201 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 DNALI1O14645 258 aaPredicted RBP12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 UFL1O94874 794 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 MT-ND3P03897 115 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 ABHD2P08910 425 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 RARBP10826 455 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 INHBCP55103 352 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 LPCAT4Q643R3 524 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 TPTE2Q6XPS3 522 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 RAPH1Q70E73 1250 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 SMC1BQ8NDV3 1235 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 PANX3Q96QZ0 392 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 PAFAH2Q99487 392 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 TMEM121Q9BTD3 319 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 GLT8D2Q9H1C3 349 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 RANBP17Q9H2T7 1088 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 GINM1Q9NU53 330 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 DDX18Q9NVP1 670 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 HSPBP1Q9NZL4 362 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 WRAP73Q9P2S5 460 aaPredicted RBP12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 NHSL1Q5SYE7 1610 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 MEI4A8MW99 385 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 GAS7O60861 476 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 DYNLT1P63172 113 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 MED21Q13503 144 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 MYBPC3Q14896 1274 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 Q4G0T1 1027 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 XXYLT1Q8NBI6 393 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 HSD17B14Q9BPX1 270 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 AMNQ9BXJ7 453 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 IKBKGQ9Y6K9 419 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 ATAD5Q96QE3 1844 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 A8MXQ7 604 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 F5H6K3 240 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 TBX3O15119 743 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 KCNQ2O43526 872 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 KLRC2P26717 231 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 TPP2P29144 1249 aaPredicted RBP12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 NSFP46459 744 aaKnown RBP12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 AP3B2Q13367 1082 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 TCEAL1Q15170 157 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 BBS9Q3SYG4 887 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 FBXO11Q86XK2 927 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 RHPN2Q8IUC4 686 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 CBWD2Q8IUF1 395 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 SLC26A7Q8TE54 656 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 CCDC124Q96CT7 223 aaKnown RBP12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 IQCGQ9H095 443 aaKnown RBP12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 KCNK13Q9HB14 408 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 SERPINA10Q9UK55 444 aa12.15□□□□□ -0.46
HMGCS1-202ENST00000433297 RXRBP28702 533 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 EPHB1P54762 984 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 RHOT1Q8IXI2 618 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 GSTCDQ8NEC7 633 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 SHKBP1Q8TBC3 707 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 ZNF395Q9H8N7 513 aaPredicted RBP12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 DDX4Q9NQI0 724 aaKnown RBP12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 SAE1Q9UBE0 346 aaPredicted RBP12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 PHF24Q9UPV7 400 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 COMMD3-BMI1R4GMX3 469 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 VAV1P15498 845 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 SLC1A1P43005 524 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 ASPHQ12797 758 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 LSAMPQ13449 338 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 OTOP1Q7RTM1 612 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 PRPF39Q86UA1 669 aaKnown RBP12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 LCA5Q86VQ0 697 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 TREML1Q86YW5 311 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 TMPRSS6Q8IU80 811 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 ARID3BQ8IVW6 561 aaPredicted RBP12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 ULK2Q8IYT8 1036 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 MCOLN2Q8IZK6 566 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 NME8Q8N427 588 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 ZNF398Q8TD17 642 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 TAS1R2Q8TE23 839 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 NAT14Q8WUY8 206 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 SNRNP27Q8WVK2 155 aaKnown RBP12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 USP6NLQ92738 828 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 PPP2R3CQ969Q6 453 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 SKA1Q96BD8 255 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 NT5C1BQ96P26 610 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 OLFM3Q96PB7 478 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 SHCBP1LQ9BZQ2 653 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms