RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 LHX1P48742 406 aa21.53■■□□□ 1.04
CSNK1E-207ENST00000430335 LEXMQ3ZCV2 418 aa21.53■■□□□ 1.04
CSNK1E-207ENST00000430335 ZNF667Q5HYK9 610 aa21.53■■□□□ 1.04
CSNK1E-207ENST00000430335 TPGS2Q68CL5 300 aa21.53■■□□□ 1.04
CSNK1E-207ENST00000430335 C11orf57Q6ZUT1 292 aaPredicted RBP21.53■■□□□ 1.04
CSNK1E-207ENST00000430335 FAM114A1Q8IWE2 563 aa21.53■■□□□ 1.04
CSNK1E-207ENST00000430335 KREMEN2Q8NCW0 462 aa21.53■■□□□ 1.04
CSNK1E-207ENST00000430335 FBXL13Q8NEE6 735 aa21.53■■□□□ 1.04
CSNK1E-207ENST00000430335 ATXN2LQ8WWM7 1075 aaKnown RBP21.53■■□□□ 1.04
CSNK1E-207ENST00000430335 IMPG2Q9BZV3 1241 aa21.53■■□□□ 1.04
CSNK1E-207ENST00000430335 MAN1C1Q9NR34 630 aa21.53■■□□□ 1.04
CSNK1E-207ENST00000430335 MAFFQ9ULX9 164 aa21.53■■□□□ 1.04
CSNK1E-207ENST00000430335 WDR27A2RRH5 827 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 H3BQ06 376 aaPredicted RBP21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 P4HA2O15460 535 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 N4BP1O75113 896 aaKnown RBP21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 PAPLNO95428 1278 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 P4HA1P13674 534 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 WARSP23381 471 aaKnown RBP21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 FMO5P49326 533 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 NFKBIBQ15653 356 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 AAK1Q2M2I8 961 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 SYCE2Q6PIF2 218 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 RTL10Q7L3V2 364 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 OR10T2Q8NGX3 314 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 KBTBD7Q8WVZ9 684 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 FAXDC2Q96IV6 333 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 MMS19Q96T76 1030 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 ACBD6Q9BR61 282 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 RAB20Q9NX57 234 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 NXF1Q9UBU9 619 aaKnown RBP21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 AFF4Q9UHB7 1163 aaKnown RBP21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 CD207Q9UJ71 328 aa21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.52■■□□□ 1.04
CSNK1E-207ENST00000430335 TSC2P49815 1807 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 CPB1P15086 417 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 ATF2P15336 505 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 ARPP19P56211 112 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 MYL7Q01449 175 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 KCNH2Q12809 1159 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 GPR17Q13304 367 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 OSTM1Q86WC4 334 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 SMRP1Q8NCR6 262 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 CCDC150Q8NCX0 1101 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 CMASQ8NFW8 434 aaPredicted RBP21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 FUCA2Q9BTY2 467 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 ZCWPW1Q9H0M4 648 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 DNAJC25Q9H1X3 360 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 S1PR5Q9H228 398 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 SFXN1Q9H9B4 322 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 DDX43Q9NXZ2 648 aaKnown RBP21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 NFE2L3Q9Y4A8 694 aa21.51■■□□□ 1.03
CSNK1E-207ENST00000430335 AFPP02771 609 aaKnown RBP21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 SPATA31D3P0C874 917 aa21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 PCSK1P29120 753 aa21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 NOP14P78316 857 aaKnown RBP21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 MRPS5P82675 430 aaKnown RBP21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 TFF2Q03403 129 aa21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 SMARCB1Q12824 385 aa21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 UVSSAQ2YD98 709 aa21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 PUS10Q3MIT2 529 aaKnown RBP21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 SPATA31D4Q6ZUB0 917 aa21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 SEMA4DQ92854 862 aa21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 PI4K2AQ9BTU6 479 aa21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 NAT10Q9H0A0 1025 aaKnown RBP21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 APOBEC3GQ9HC16 384 aaKnown RBP21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 ZDHHC7Q9NXF8 308 aa21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 MAGEC2Q9UBF1 373 aaPredicted RBP21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 POLIQ9UNA4 740 aa21.5■■□□□ 1.03
CSNK1E-207ENST00000430335 XIRP2A4UGR9 3374 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 ZMYND10O75800 440 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 TSPY1Q01534 308 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 ITIH3Q06033 890 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 CETN1Q12798 172 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 SMAD4Q13485 552 aaKnown RBP21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 LIN9Q5TKA1 542 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 SPOPLQ6IQ16 392 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 CCDC149Q6ZUS6 474 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 DCP1BQ8IZD4 617 aaKnown RBP21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 TMEM209Q96SK2 561 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 BPIFA3Q9BQP9 254 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 MRPL45Q9BRJ2 306 aaKnown RBP21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 RHOBTB2Q9BYZ6 727 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 NIF3L1Q9GZT8 377 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 ADAM7Q9H2U9 754 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 SMYD3Q9H7B4 428 aa21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 SAMSN1Q9NSI8 373 aaKnown RBP21.49■■□□□ 1.03
CSNK1E-207ENST00000430335 PLXNA3P51805 1871 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 SYCE3A1L190 88 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 CLSTN1O94985 981 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 C8AP07357 584 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 OR4Q2P0C623 313 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 HOXA9P31269 272 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 ELF1P32519 619 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 GNL1P36915 607 aaPredicted RBP21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 ASPAP45381 313 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 MTIF2P46199 727 aaKnown RBP21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 MYL5Q02045 173 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 ANO6Q4KMQ2 910 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms