RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 PRPF6O94906 941 aaKnown RBP18.48■□□□□ 0.55
CPSF4-203ENST00000430038 GCNT3O95395 438 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 ODC1P11926 461 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 IDEP14735 1019 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 GAP43P17677 238 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 ATF6P18850 670 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 STAT6P42226 847 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 PFKPQ01813 784 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 SLC39A12Q504Y0 691 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 FOXD4L5Q5VV16 416 aaPredicted RBP18.48■□□□□ 0.55
CPSF4-203ENST00000430038 ADSSL1Q8N142 457 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 ELMOD1Q8N336 334 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 FOXD4L4Q8WXT5 416 aaPredicted RBP18.48■□□□□ 0.55
CPSF4-203ENST00000430038 CLDN23Q96B33 292 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 HVCN1Q96D96 273 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 ACCSQ96QU6 501 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 OXCT2Q9BYC2 517 aaPredicted RBP18.48■□□□□ 0.55
CPSF4-203ENST00000430038 PCIF1Q9H4Z3 704 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 OLFML3Q9NRN5 406 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 PANK4Q9NVE7 773 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 SEL1LQ9UBV2 794 aa18.48■□□□□ 0.55
CPSF4-203ENST00000430038 TAF6P49848 677 aa18.47■□□□□ 0.55
CPSF4-203ENST00000430038 CCDC142Q17RM4 750 aa18.47■□□□□ 0.55
CPSF4-203ENST00000430038 WDR44Q5JSH3 913 aa18.47■□□□□ 0.55
CPSF4-203ENST00000430038 C1orf127Q8N9H9 656 aa18.47■□□□□ 0.55
CPSF4-203ENST00000430038 STKLD1Q8NE28 680 aa18.47■□□□□ 0.55
CPSF4-203ENST00000430038 TRMT61BQ9BVS5 477 aaKnown RBP18.47■□□□□ 0.55
CPSF4-203ENST00000430038 OSBPL6Q9BZF3 934 aa18.47■□□□□ 0.55
CPSF4-203ENST00000430038 ZSCAN16Q9H4T2 348 aaPredicted RBP18.47■□□□□ 0.55
CPSF4-203ENST00000430038 IL21Q9HBE4 155 aa18.47■□□□□ 0.55
CPSF4-203ENST00000430038 ZNF638Q14966 1978 aaKnown RBP18.47■□□□□ 0.55
CPSF4-203ENST00000430038 PTPRJQ12913 1337 aa18.47■□□□□ 0.55
CPSF4-203ENST00000430038 DNAH14Q0VDD8 3507 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 HEPACAM2A8MVW5 462 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 KPNA7A9QM74 516 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 HCRTO43612 131 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 PSMC3P17980 439 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 GDI1P31150 447 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 ABCD1P33897 745 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 EPHB3P54753 998 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 POU5F1Q01860 360 aaKnown RBP18.46■□□□□ 0.55
CPSF4-203ENST00000430038 POSTNQ15063 836 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 SHC4Q6S5L8 630 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 CCDC73Q6ZRK6 1079 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 MFSD6LQ8IWD5 586 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 BRSK2Q8IWQ3 736 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 PSMG2Q969U7 264 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 BRD9Q9H8M2 597 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 PDE11AQ9HCR9 933 aa18.46■□□□□ 0.55
CPSF4-203ENST00000430038 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.46■□□□□ 0.55
CPSF4-203ENST00000430038 ATG2BQ96BY7 2078 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 CASP1P29466 404 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 POLR2BP30876 1174 aaKnown RBP18.45■□□□□ 0.54
CPSF4-203ENST00000430038 ALDH1A3P47895 512 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 GPR15P49685 360 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 PKP1Q13835 747 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 LMBRD2Q68DH5 695 aaPredicted RBP18.45■□□□□ 0.54
CPSF4-203ENST00000430038 ARMCX5Q6P1M9 558 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 TSSK4Q6SA08 328 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 TMEM150AQ86TG1 271 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 ARID3BQ8IVW6 561 aaPredicted RBP18.45■□□□□ 0.54
CPSF4-203ENST00000430038 GIPC2Q8TF65 315 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 DNASE1L2Q92874 299 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 KBTBD4Q9NVX7 518 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 SPATA6Q9NWH7 488 aaPredicted RBP18.45■□□□□ 0.54
CPSF4-203ENST00000430038 SIX4Q9UIU6 781 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 AGAP1Q9UPQ3 857 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 GREB1Q4ZG55 1949 aa18.45■□□□□ 0.54
CPSF4-203ENST00000430038 SPTLC2O15270 562 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 IL18RAPO95256 599 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 ITGB3P05106 788 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 GARTP22102 1010 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 GABRR2P28476 465 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 TXLNAP40222 546 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 SOX9P48436 509 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 CYP4F8P98187 520 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 TFAMQ00059 246 aaKnown RBP18.44■□□□□ 0.54
CPSF4-203ENST00000430038 STK38Q15208 465 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 FOXD4L6Q3SYB3 417 aaPredicted RBP18.44■□□□□ 0.54
CPSF4-203ENST00000430038 FOXD4L3Q6VB84 417 aaPredicted RBP18.44■□□□□ 0.54
CPSF4-203ENST00000430038 ZNF852Q6ZMS4 543 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 OSTM1Q86WC4 334 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 LEMD2Q8NC56 503 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 ZFYVE19Q96K21 471 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 SEPT5Q99719 369 aaPredicted RBP18.44■□□□□ 0.54
CPSF4-203ENST00000430038 BCO2Q9BYV7 579 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 NDRG2Q9UN36 371 aaKnown RBP18.44■□□□□ 0.54
CPSF4-203ENST00000430038 L1RE1Q9UN81 338 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 PCDHB13Q9Y5F0 798 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 ANAPC1Q9H1A4 1944 aa18.44■□□□□ 0.54
CPSF4-203ENST00000430038 TULP1O00294 542 aaPredicted RBP18.43■□□□□ 0.54
CPSF4-203ENST00000430038 PRAMEF12O95522 483 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 HAPLN1P10915 354 aaPredicted RBP18.43■□□□□ 0.54
CPSF4-203ENST00000430038 HMGA1P17096 107 aaKnown RBP18.43■□□□□ 0.54
CPSF4-203ENST00000430038 PAX3P23760 479 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 HOXC13P31276 330 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 CSTF1Q05048 431 aaKnown RBP18.43■□□□□ 0.54
CPSF4-203ENST00000430038 MTAPQ13126 283 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 SDHAF4Q5VUM1 108 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 PDCL2Q8N4E4 241 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms