RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 PUS10Q3MIT2 529 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 KIAA1755Q5JYT7 1200 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 EPHA10Q5JZY3 1008 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 USPL1Q5W0Q7 1092 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 CDH24Q86UP0 819 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 ERI1Q8IV48 349 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 CHP1Q99653 195 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 TRIM49P0CI25 452 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 TRIM49CP0CI26 452 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 TKTP29401 623 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 ARHGDIAP52565 204 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 DMP1Q13316 513 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 MB21D2Q8IYB1 491 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 RAB2BQ8WUD1 216 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 NACA2Q9H009 215 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 KCNK4Q9NYG8 393 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 WARS2Q9UGM6 360 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 TMEM120BA0PK00 339 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 POC1B-GALNT4F8VUJ3 575 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 PRKAB2O43741 272 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 HADHAP40939 763 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 NAB2Q15742 525 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 SLC18A3Q16572 532 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 TTC33Q6PID6 262 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 DHDDSQ86SQ9 333 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 OTULINQ96BN8 352 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 CEP44Q9C0F1 390 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 GDF3Q9NR23 364 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 LRRC10BA6NIK2 292 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 PLEKHA8P1O95397 391 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 ALOX15P16050 662 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 CNTFP26441 200 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 TBX2Q13207 712 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 ASPRV1Q53RT3 343 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 HEATR4Q86WZ0 1026 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 IL25Q9H293 177 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 TAGLN3Q9UI15 199 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 GGA1Q9UJY5 639 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 ITGA2BP08514 1039 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 MX2P20592 715 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 GNG2P59768 71 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 NAA20P61599 178 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 FMR1Q06787 632 aaKnown RBP eCLIP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 PDZD4Q76G19 769 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 NLRP10Q86W26 655 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 CDAN1Q8IWY9 1227 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 DPF2Q92785 391 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 TUFT1Q9NNX1 390 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 AP5Z1O43299 807 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 ATP9AO75110 1047 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 SUPT3HO75486 399 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 PAX3P23760 479 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 BNIP1Q12981 228 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 KSR1Q8IVT5 923 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 GIMAP8Q8ND71 665 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 SYTL5Q8TDW5 730 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 AGAP11Q8TF27 550 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 DDX17Q92841 729 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 STRBPQ96SI9 672 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 FETUBQ9UGM5 382 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 TAF4O00268 1085 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 IFNB1P01574 187 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 TMOD1P28289 359 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 SLCO1A2P46721 670 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 PRKAA2P54646 552 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 ECT2LQ008S8 904 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 DGUOKQ16854 277 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 AHI1Q8N157 1196 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 SCFD2Q8WU76 684 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 GJA10Q969M2 543 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 PPP1R2P1Q96PQ5 205 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 SUCOQ9UBS9 1254 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 TMEM247A6NEH6 219 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 K7ENM7 598 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 C2CD2LO14523 706 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 ITGB3P05106 788 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 ATP2C1P98194 919 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 TRIM72Q6ZMU5 477 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 MS4A14Q96JA4 679 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 SHROOM3Q8TF72 1996 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 TTC34A8MYJ7 566 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 SLCO1B7G3V0H7 640 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 SGK1O00141 431 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 GNPATO15228 680 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 C7P10643 843 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 LRRC41Q15345 812 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 HM13Q8TCT9 377 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 TSSK1BQ9BXA7 367 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 SNAP23O00161 211 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 PEX1O43933 1283 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 ACSL3O95573 720 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 TNNI1P19237 187 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 ABCE1P61221 599 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 CENPCQ03188 943 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 ITGA7Q13683 1181 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 MYBPC3Q14896 1274 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 NR1D2Q14995 579 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 EFHC1Q5JVL4 640 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 EP400NLQ6ZTU2 488 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms