RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ARHGEF26Q96DR7 871 aa9.48□□□□□ -0.89
SMC6-204ENST00000428868 FAM81BQ96LP2 452 aa9.48□□□□□ -0.89
SMC6-204ENST00000428868 ZNF560Q96MR9 790 aa9.48□□□□□ -0.89
SMC6-204ENST00000428868 CASD1Q96PB1 797 aa9.48□□□□□ -0.89
SMC6-204ENST00000428868 TSPAN18Q96SJ8 248 aa9.48□□□□□ -0.89
SMC6-204ENST00000428868 MMS19Q96T76 1030 aa9.48□□□□□ -0.89
SMC6-204ENST00000428868 TBC1D13Q9NVG8 400 aa9.48□□□□□ -0.89
SMC6-204ENST00000428868 PUF60Q9UHX1 559 aaKnown RBP9.48□□□□□ -0.89
SMC6-204ENST00000428868 PAXBP1Q9Y5B6 917 aa9.48□□□□□ -0.89
SMC6-204ENST00000428868 BZW2Q9Y6E2 419 aaKnown RBP9.48□□□□□ -0.89
SMC6-204ENST00000428868 OBSL1O75147 1896 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 PJA2O43164 708 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 ZSCAN12O43309 604 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 ATMINO43313 823 aaPredicted RBP9.47□□□□□ -0.89
SMC6-204ENST00000428868 THAP12O43422 761 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 UPP2O95045 317 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 LMO2P25791 158 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 PBX3P40426 434 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 EPHB4P54760 987 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 GALCP54803 685 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 DSC1Q08554 894 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 MYO1EQ12965 1108 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 TUSC3Q13454 348 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 SPA17Q15506 151 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 CLEC16AQ2KHT3 1053 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 SV2CQ496J9 727 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 C2CD6Q53TS8 623 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 LLGL2Q6P1M3 1020 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 DENND1BQ6P3S1 775 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 ALKBH5Q6P6C2 394 aaKnown RBP9.47□□□□□ -0.89
SMC6-204ENST00000428868 GLB1LQ6UWU2 654 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 COLGALT2Q8IYK4 626 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 C7orf61Q8IZ16 206 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 PDCL2Q8N4E4 241 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 ZNF606Q8WXB4 792 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 SENP8Q96LD8 212 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 WDR24Q96S15 920 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 ELAC1Q9H777 363 aaKnown RBP9.47□□□□□ -0.89
SMC6-204ENST00000428868 CYP3A43Q9HB55 503 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 UBN1Q9NPG3 1134 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 SLC38A7Q9NVC3 462 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 GDAP2Q9NXN4 497 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 CHORDC1Q9UHD1 332 aaPredicted RBP9.47□□□□□ -0.89
SMC6-204ENST00000428868 BARX2Q9UMQ3 279 aaPredicted RBP9.47□□□□□ -0.89
SMC6-204ENST00000428868 GUCA1BQ9UMX6 200 aa9.47□□□□□ -0.89
SMC6-204ENST00000428868 TIMM13Q9Y5L4 95 aaPredicted RBP9.47□□□□□ -0.89
SMC6-204ENST00000428868 LAMA2P24043 3122 aaKnown RBP9.47□□□□□ -0.89
SMC6-204ENST00000428868 MACROD2A1Z1Q3 448 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 TBKBP1A7MCY6 615 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 CYB561D2O14569 222 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 BUB1O43683 1085 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 MOCS3O95396 460 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 CYP1A1P04798 512 aaPredicted RBP9.46□□□□□ -0.9
SMC6-204ENST00000428868 PDGFRBP09619 1106 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 CCDC172P0C7W6 258 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 UNGP13051 313 aaPredicted RBP9.46□□□□□ -0.9
SMC6-204ENST00000428868 CD19P15391 556 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 RAG1P15918 1043 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 ABCB4P21439 1286 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 ACAT1P24752 427 aaKnown RBP9.46□□□□□ -0.9
SMC6-204ENST00000428868 AARSP49588 968 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMC6-204ENST00000428868 PSMC1P62191 440 aaKnown RBP9.46□□□□□ -0.9
SMC6-204ENST00000428868 NOMO3P69849 1222 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 KRT83P78385 493 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 TIGD5Q53EQ6 642 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 KIAA0319Q5VV43 1072 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 NAA35Q5VZE5 725 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 WSCD1Q658N2 575 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 MFSD5Q6N075 450 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 FAM117BQ6P1L5 589 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 C16orf59Q7L2K0 433 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 PHLDB2Q86SQ0 1253 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 ACOT1Q86TX2 421 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 NPAS4Q8IUM7 802 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 ADGRF2Q8IZF7 708 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 SLC35F6Q8N357 371 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 C12orf29Q8N999 325 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 BCL7CQ8WUZ0 217 aaPredicted RBP9.46□□□□□ -0.9
SMC6-204ENST00000428868 CPA5Q8WXQ8 436 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 CYFIP2Q96F07 1278 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 TMEM176AQ96HP8 235 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 ISCUQ9H1K1 167 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 NRDE2Q9H7Z3 1164 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 FAM49BQ9NUQ9 324 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 TJP2Q9UDY2 1190 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 CYTH4Q9UIA0 394 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 LRFN2Q9ULH4 789 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 PRG3Q9Y2Y8 225 aaPredicted RBP9.46□□□□□ -0.9
SMC6-204ENST00000428868 R3HCC1Q9Y3T6 440 aaKnown RBP9.46□□□□□ -0.9
SMC6-204ENST00000428868 PCDHB7Q9Y5E2 793 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 CAPN6Q9Y6Q1 641 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 NCANO14594 1321 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 DENND4CQ5VZ89 1909 aa9.46□□□□□ -0.9
SMC6-204ENST00000428868 MTCL1Q9Y4B5 1905 aaKnown RBP9.45□□□□□ -0.9
SMC6-204ENST00000428868 DLL1O00548 723 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 ATP2C2O75185 946 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 TACC1O75410 805 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 MICAL2O94851 1124 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 PARNO95453 639 aaKnown RBP9.45□□□□□ -0.9
SMC6-204ENST00000428868 FTLP02792 175 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms