RNA–Protein interactions for RNA: ENST00000428479.3

GGCX-204, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 4

Gene GGCX, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-204ENST00000428479 MAN1C1Q9NR34 630 aa13.21□□□□□ -0.29
GGCX-204ENST00000428479 NXF1Q9UBU9 619 aaKnown RBP13.21□□□□□ -0.29
GGCX-204ENST00000428479 DPP7Q9UHL4 492 aa13.21□□□□□ -0.29
GGCX-204ENST00000428479 CD207Q9UJ71 328 aa13.21□□□□□ -0.29
GGCX-204ENST00000428479 FBXW11Q9UKB1 542 aa13.21□□□□□ -0.29
GGCX-204ENST00000428479 EYSQ5T1H1 3165 aa13.21□□□□□ -0.3
GGCX-204ENST00000428479 GABRDO14764 452 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 LRRN2O75325 713 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 LETM1O95202 739 aaPredicted RBP13.2□□□□□ -0.3
GGCX-204ENST00000428479 FAM163BP0C2L3 166 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 OR4Q2P0C623 313 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 CCDC192P0DO97 292 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 CPB1P15086 417 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 PIK3CAP42336 1068 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 FMO5P49326 533 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 TNNC1P63316 161 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 GPR17Q13304 367 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 ZNF667Q5HYK9 610 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 TPGS2Q68CL5 300 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 ADGRF2Q8IZF7 708 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 C12orf76Q8N812 135 aaPredicted RBP13.2□□□□□ -0.3
GGCX-204ENST00000428479 SMRP1Q8NCR6 262 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 FBXL13Q8NEE6 735 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 ENOX1Q8TC92 643 aaKnown RBP13.2□□□□□ -0.3
GGCX-204ENST00000428479 ATXN2LQ8WWM7 1075 aaKnown RBP13.2□□□□□ -0.3
GGCX-204ENST00000428479 SEMA4DQ92854 862 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 CNOT6LQ96LI5 555 aaKnown RBP13.2□□□□□ -0.3
GGCX-204ENST00000428479 TMEM209Q96SK2 561 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 MMS19Q96T76 1030 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 PI4K2AQ9BTU6 479 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 DNAJC25Q9H1X3 360 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 S1PR5Q9H228 398 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 THAP9Q9H5L6 903 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 POLIQ9UNA4 740 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 COQ4Q9Y3A0 265 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 C2orf16Q68DN1 1984 aa13.2□□□□□ -0.3
GGCX-204ENST00000428479 PMM2O15305 246 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 TACC1O75410 805 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 ZMYND10O75800 440 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 ATF2P15336 505 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 WARSP23381 471 aaKnown RBP13.19□□□□□ -0.3
GGCX-204ENST00000428479 LHX1P48742 406 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 MRPS5P82675 430 aaKnown RBP13.19□□□□□ -0.3
GGCX-204ENST00000428479 MYL7Q01449 175 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 KCNH2Q12809 1159 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 NFKBIBQ15653 356 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 AAK1Q2M2I8 961 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 SPOPLQ6IQ16 392 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 ELMSAN1Q6PJG2 1045 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 RNF19BQ6ZMZ0 732 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.19□□□□□ -0.3
GGCX-204ENST00000428479 ACBD6Q9BR61 282 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 APOL5Q9BWW9 433 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 IMPG2Q9BZV3 1241 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 ZCWPW1Q9H0M4 648 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 SMYD3Q9H7B4 428 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 APOBEC3GQ9HC16 384 aaKnown RBP13.19□□□□□ -0.3
GGCX-204ENST00000428479 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
GGCX-204ENST00000428479 RAB20Q9NX57 234 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 DDX43Q9NXZ2 648 aaKnown RBP13.19□□□□□ -0.3
GGCX-204ENST00000428479 AFF4Q9UHB7 1163 aaKnown RBP13.19□□□□□ -0.3
GGCX-204ENST00000428479 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.19□□□□□ -0.3
GGCX-204ENST00000428479 PRUNE2Q8WUY3 3088 aa13.19□□□□□ -0.3
GGCX-204ENST00000428479 GRXCR2A6NFK2 248 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 MBTPS2O43462 519 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 HCRTO43612 131 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 RFPL2O75678 378 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 PAPLNO95428 1278 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 SEC24AO95486 1093 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 VNN2O95498 520 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 C8AP07357 584 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 ACAT1P24752 427 aaKnown RBP13.18□□□□□ -0.3
GGCX-204ENST00000428479 LMO2P25791 158 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 KCNQ1P51787 676 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 CDH8P55286 799 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 NOP14P78316 857 aaKnown RBP13.18□□□□□ -0.3
GGCX-204ENST00000428479 ITIH3Q06033 890 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 SMAD4Q13485 552 aaKnown RBP13.18□□□□□ -0.3
GGCX-204ENST00000428479 UVSSAQ2YD98 709 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 SLC39A12Q504Y0 691 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 RARS2Q5T160 578 aaKnown RBP13.18□□□□□ -0.3
GGCX-204ENST00000428479 PTCRAQ6ISU1 281 aaPredicted RBP13.18□□□□□ -0.3
GGCX-204ENST00000428479 SCARA5Q6ZMJ2 495 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 LRRTM3Q86VH5 581 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 TCEAL8Q8IYN2 117 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 CMASQ8NFW8 434 aaPredicted RBP13.18□□□□□ -0.3
GGCX-204ENST00000428479 SLC7A14Q8TBB6 771 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 FEZF2Q8TBJ5 459 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 ASB2Q96Q27 587 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 MRPL45Q9BRJ2 306 aaKnown RBP13.18□□□□□ -0.3
GGCX-204ENST00000428479 FUCA2Q9BTY2 467 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 SDCBP2Q9H190 292 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 ADAM7Q9H2U9 754 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 SFXN1Q9H9B4 322 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.18□□□□□ -0.3
GGCX-204ENST00000428479 MAFFQ9ULX9 164 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 NFE2L3Q9Y4A8 694 aa13.18□□□□□ -0.3
GGCX-204ENST00000428479 CCDC195A0A1B0GUA6 201 aa13.17□□□□□ -0.3
GGCX-204ENST00000428479 SYCE3A1L190 88 aa13.17□□□□□ -0.3
GGCX-204ENST00000428479 MTMR11A4FU01 709 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms