RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ZBED1O96006 694 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 CD48P09326 243 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 RELAQ04206 551 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 KRT81Q14533 505 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 TRIP13Q15645 432 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-206ENST00000428313 BMT2Q1RMZ1 405 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 PCNX4Q63HM2 1172 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 TMC7Q7Z402 723 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 FAM186BQ8IYM0 893 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 ALLCQ8N6M5 410 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 ALKBH8Q96BT7 664 aaKnown RBP16.93■□□□□ 0.3
C9orf3-206ENST00000428313 EIF2AQ9BY44 585 aaKnown RBP16.93■□□□□ 0.3
C9orf3-206ENST00000428313 KIAA1522Q9P206 1035 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-206ENST00000428313 PADI4Q9UM07 663 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 AK5Q9Y6K8 562 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 TNFAIP8O95379 198 aa16.92■□□□□ 0.3
C9orf3-206ENST00000428313 ATP5BP06576 529 aaKnown RBP16.92■□□□□ 0.3
C9orf3-206ENST00000428313 PAX3P23760 479 aa16.92■□□□□ 0.3
C9orf3-206ENST00000428313 CPA2P48052 419 aa16.92■□□□□ 0.3
C9orf3-206ENST00000428313 CREB5Q02930 508 aa16.92■□□□□ 0.3
C9orf3-206ENST00000428313 SNAPC2Q13487 334 aa16.92■□□□□ 0.3
C9orf3-206ENST00000428313 EFHC1Q5JVL4 640 aa16.92■□□□□ 0.3
C9orf3-206ENST00000428313 LPCAT4Q643R3 524 aa16.92■□□□□ 0.3
C9orf3-206ENST00000428313 NLRX1Q86UT6 975 aa16.92■□□□□ 0.3
C9orf3-206ENST00000428313 ZNF410Q86VK4 478 aa16.92■□□□□ 0.3
C9orf3-206ENST00000428313 NAP1L4Q99733 375 aaKnown RBP16.92■□□□□ 0.3
C9orf3-206ENST00000428313 TCHPQ9BT92 498 aa16.92■□□□□ 0.3
C9orf3-206ENST00000428313 FETUBQ9UGM5 382 aa16.92■□□□□ 0.3
C9orf3-206ENST00000428313 A0A1W2PPM1 405 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 TXNDC9O14530 226 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 P4HA2O15460 535 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 TDP2O95551 362 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 KRT4P19013 534 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 PEX2P28328 305 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 HOXD13P35453 343 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 IL6STP40189 918 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-206ENST00000428313 CASP5P51878 434 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 APOFQ13790 326 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 PRKD1Q15139 912 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-206ENST00000428313 CLEC16AQ2KHT3 1053 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 MAP7D1Q3KQU3 841 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 FBXO27Q8NI29 283 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 CLPTM1LQ96KA5 538 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 SNX27Q96L92 541 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 GRIP2Q9C0E4 1043 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 DCP1AQ9NPI6 582 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-206ENST00000428313 KCNK4Q9NYG8 393 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 ADAMTS6Q9UKP5 1117 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 SNAP23O00161 211 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 PIK3CDO00329 1044 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 ENO1P06733 434 aaKnown RBP16.91■□□□□ 0.3
C9orf3-206ENST00000428313 MYL2P10916 166 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 STIP1P31948 543 aaKnown RBP16.91■□□□□ 0.3
C9orf3-206ENST00000428313 FDFT1P37268 417 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 NR1H2P55055 460 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 PFKPQ01813 784 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 EVX2Q03828 476 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 CCDC142Q17RM4 750 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 RNF111Q6ZNA4 994 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 VTI1AQ96AJ9 217 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 CCT7Q99832 543 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 CRNKL1Q9BZJ0 848 aaKnown RBP16.91■□□□□ 0.3
C9orf3-206ENST00000428313 SAYSD1Q9NPB0 183 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 ARMCX1Q9P291 453 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 APEX2Q9UBZ4 518 aa16.91■□□□□ 0.3
C9orf3-206ENST00000428313 NIP7Q9Y221 180 aaKnown RBP eCLIP16.91■□□□□ 0.3
C9orf3-206ENST00000428313 E9PMD0 336 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 EML1O00423 815 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 KRT18P05783 430 aaKnown RBP16.9■□□□□ 0.3
C9orf3-206ENST00000428313 TFAP4Q01664 338 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 NCOA4Q13772 614 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 ANO5Q75V66 913 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 ASTN1O14525 1302 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 WDR91A4D1P6 747 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 hCG_1984214I3L0E3 225 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 CCNT2O60583 730 aaKnown RBP16.9■□□□□ 0.3
C9orf3-206ENST00000428313 CDH2P19022 906 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-206ENST00000428313 SLC1A1P43005 524 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 FMO5P49326 533 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 CASP4P49662 377 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 NCKAP1LP55160 1127 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 CACNB1Q02641 598 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-206ENST00000428313 HIC1Q14526 733 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 SF3B3Q15393 1217 aaKnown RBP16.9■□□□□ 0.3
C9orf3-206ENST00000428313 LRRC36Q1X8D7 754 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 MFSD4BQ5TF39 518 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 ZNF713Q8N859 430 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-206ENST00000428313 ZNF564Q8TBZ8 553 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-206ENST00000428313 TCP10LQ8TDR4 215 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 UTP6Q9NYH9 597 aaKnown RBP16.9■□□□□ 0.3
C9orf3-206ENST00000428313 RAB26Q9ULW5 256 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 FAM32AQ9Y421 112 aaKnown RBP16.9■□□□□ 0.3
C9orf3-206ENST00000428313 CEPT1Q9Y6K0 416 aa16.9■□□□□ 0.3
C9orf3-206ENST00000428313 LAMB2P55268 1798 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 A0A088AWK7 358 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 TTLL13PA6NNM8 815 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 EDIL3O43854 480 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 DKC1O60832 514 aaKnown RBP eCLIP16.89■□□□□ 0.293e-6■■□□□ 13.1
C9orf3-206ENST00000428313 HDAC4P56524 1084 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 CDK18Q07002 472 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms