RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 ASPAP45381 313 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 PPIL2Q13356 520 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 HOOK3Q86VS8 718 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 WDTC1Q8N5D0 677 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 MYCBPAPQ8TBZ2 947 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 SLC10A4Q96EP9 437 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 XYLT2Q9H1B5 865 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 CDC42EP4Q9H3Q1 356 aaKnown RBP12.25□□□□□ -0.45
UBR4-207ENST00000425413 SMYD3Q9H7B4 428 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 SYNCQ9H7C4 482 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 CTNNAL1Q9UBT7 734 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 PARP2Q9UGN5 583 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 SCINQ9Y6U3 715 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 LACTBL1A8MY62 500 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 TP73O15350 636 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 LGR5O75473 907 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 GAS8O95995 478 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 IFNAR2P48551 515 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 ZNF132P52740 706 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 MBTD1Q05BQ5 628 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 C1QBPQ07021 282 aaKnown RBP12.25□□□□□ -0.45
UBR4-207ENST00000425413 NFX1Q12986 1120 aaKnown RBP12.25□□□□□ -0.45
UBR4-207ENST00000425413 TFDP1Q14186 410 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 JADE1Q6IE81 842 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 PLPPR4Q7Z2D5 763 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 TMEM35BQ8NCS4 154 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 MGARPQ8TDB4 240 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 RAPGEF5Q92565 580 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 TWNKQ96RR1 684 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 SPON1Q9HCB6 807 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 MLXIPLQ9NP71 852 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 AAASQ9NRG9 546 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 ANAPC5Q9UJX4 755 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 WDR90Q96KV7 1748 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 IGKV6-21A0A0C4DH24 114 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.24□□□□□ -0.45
UBR4-207ENST00000425413 HBP1O60381 514 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 LGALS2P05162 132 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 STAG3L1P0CL83 205 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 ADORA2AP29274 412 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 QPCTQ16769 361 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 TTC31Q49AM3 519 aaPredicted RBP12.24□□□□□ -0.45
UBR4-207ENST00000425413 RNF187Q5TA31 235 aaPredicted RBP12.24□□□□□ -0.45
UBR4-207ENST00000425413 AGBL2Q5U5Z8 902 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 CYP4F22Q6NT55 531 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 B4GALNT4Q76KP1 1039 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 C1orf127Q8N9H9 656 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 C9orf72Q96LT7 481 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 C2orf40Q9H1Z8 148 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 TBK1Q9UHD2 729 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 CYTH4Q9UIA0 394 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 SIX4Q9UIU6 781 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 DNPEPQ9ULA0 475 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 KCNH4Q9UQ05 1017 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 ZNF148Q9UQR1 794 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 TMEM191CA6NGB0 347 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 RASGRF2O14827 1237 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 C22orf31O95567 290 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 ITGBL1O95965 494 aaPredicted RBP12.24□□□□□ -0.45
UBR4-207ENST00000425413 IFNB1P01574 187 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 RFC1P35251 1148 aaPredicted RBP12.24□□□□□ -0.45
UBR4-207ENST00000425413 EIF3BP55884 814 aaKnown RBP12.24□□□□□ -0.45
UBR4-207ENST00000425413 ENPEPQ07075 957 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 TSHZ1Q6ZSZ6 1077 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 FASTKD5Q7L8L6 764 aaKnown RBP12.24□□□□□ -0.45
UBR4-207ENST00000425413 C12orf50Q8NA57 414 aaPredicted RBP12.24□□□□□ -0.45
UBR4-207ENST00000425413 JOSD2Q8TAC2 188 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 NLRP7Q8WX94 980 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 MRRFQ96E11 262 aaKnown RBP12.24□□□□□ -0.45
UBR4-207ENST00000425413 SNF8Q96H20 258 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 PAPPA2Q9BXP8 1791 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 ADAM33Q9BZ11 813 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 SDCBP2Q9H190 292 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 FZD8Q9H461 694 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 IFT122Q9HBG6 1241 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 ERAP1Q9NZ08 941 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 PCSK1NQ9UHG2 260 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 IP6K2Q9UHH9 426 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 PTPN20Q4JDL3 420 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 ZNF667Q5HYK9 610 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 MAP1SQ66K74 1059 aaPredicted RBP12.24□□□□□ -0.45
UBR4-207ENST00000425413 DPY19L2Q6NUT2 758 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 PACS2Q86VP3 889 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 ATL2Q8NHH9 583 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 UBA3Q8TBC4 463 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 PTPRHQ9HD43 1115 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 CNTN6Q9UQ52 1028 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 CEP83Q9Y592 693 aa12.24□□□□□ -0.45
UBR4-207ENST00000425413 EVPLQ92817 2033 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 PTPRFP10586 1907 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 MEFVO15553 781 aaPredicted RBP12.23□□□□□ -0.45
UBR4-207ENST00000425413 PSTPIP1O43586 416 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 ATP2C2O75185 946 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 NUDT17P0C025 328 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 RARGP13631 454 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 CHN1P15882 459 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 CREB1P16220 341 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 IVDP26440 423 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 ARHGAP1Q07960 439 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 IFT88Q13099 833 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms