RNA–Protein interactions for RNA: ENST00000424898.2

PDZD9-201, Transcript of PDZ domain containing 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDZD9, Length 1,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD9-201ENST00000424898 ADAM28Q9UKQ2 775 aa13.18□□□□□ -0.3
PDZD9-201ENST00000424898 R3HCC1Q9Y3T6 440 aaKnown RBP13.18□□□□□ -0.3
PDZD9-201ENST00000424898 CITO14578 2027 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 PRR5-ARHGAP8B1AHC4 643 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 TMEM189-UBE2V1I3L0A0 370 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 PODXLO00592 558 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 SLC16A3O15427 465 aaKnown RBP13.17□□□□□ -0.3
PDZD9-201ENST00000424898 TRAPPC3O43617 180 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 AKAP3O75969 853 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 B3GAT3O94766 335 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 TNNC2P02585 160 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 PAX3P23760 479 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 ERCC5P28715 1186 aaPredicted RBP13.17□□□□□ -0.3
PDZD9-201ENST00000424898 AP3M2P53677 418 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 PMS1P54277 932 aaKnown RBP13.17□□□□□ -0.3
PDZD9-201ENST00000424898 STX17P56962 302 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 ARHGAP8P85298 464 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 LMNB2Q03252 620 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 SOX4Q06945 474 aaPredicted RBP13.17□□□□□ -0.3
PDZD9-201ENST00000424898 ENPEPQ07075 957 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 STX1AQ16623 288 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 TPD52L1Q16890 204 aaPredicted RBP13.17□□□□□ -0.3
PDZD9-201ENST00000424898 DPCR1Q3MIW9 517 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 TTI2Q6NXR4 508 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 EFCAB13Q8IY85 973 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 VPS52Q8N1B4 723 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 CSGALNACT2Q8N6G5 542 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 TMC2Q8TDI7 906 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 PARD3BQ8TEW8 1205 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 RSAD2Q8WXG1 361 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 SECISBP2LQ93073 1101 aaKnown RBP13.17□□□□□ -0.3
PDZD9-201ENST00000424898 CGRRF1Q99675 332 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 PAAF1Q9BRP4 392 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 SFXN1Q9H9B4 322 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 INTS13Q9NVM9 706 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 RALYQ9UKM9 306 aaKnown RBP13.17□□□□□ -0.3
PDZD9-201ENST00000424898 ZFHX4Q86UP3 3567 aa13.17□□□□□ -0.3
PDZD9-201ENST00000424898 KIF4AO95239 1232 aa13.16□□□□□ -0.3
PDZD9-201ENST00000424898 GNA14O95837 355 aa13.16□□□□□ -0.3
PDZD9-201ENST00000424898 GBP2P32456 591 aaPredicted RBP13.16□□□□□ -0.3
PDZD9-201ENST00000424898 VAMP7P51809 220 aa13.16□□□□□ -0.3
PDZD9-201ENST00000424898 WNT7BP56706 349 aa13.16□□□□□ -0.3
PDZD9-201ENST00000424898 COL9A2Q14055 689 aaPredicted RBP13.16□□□□□ -0.3
PDZD9-201ENST00000424898 FILIP1Q7Z7B0 1213 aa13.16□□□□□ -0.3
PDZD9-201ENST00000424898 TMEM173Q86WV6 379 aaPredicted RBP13.16□□□□□ -0.3
PDZD9-201ENST00000424898 ZC3H3Q8IXZ2 948 aaKnown RBP13.16□□□□□ -0.3
PDZD9-201ENST00000424898 SLC22A17Q8WUG5 538 aa13.16□□□□□ -0.3
PDZD9-201ENST00000424898 RABGGTAQ92696 567 aa13.16□□□□□ -0.3
PDZD9-201ENST00000424898 DUSP9Q99956 384 aaKnown RBP13.16□□□□□ -0.3
PDZD9-201ENST00000424898 RTKNQ9BST9 563 aa13.16□□□□□ -0.3
PDZD9-201ENST00000424898 METTL14Q9HCE5 456 aaKnown RBP13.16□□□□□ -0.3
PDZD9-201ENST00000424898 MARCH5Q9NX47 278 aa13.16□□□□□ -0.3
PDZD9-201ENST00000424898 CACNG4Q9UBN1 327 aa13.16□□□□□ -0.3
PDZD9-201ENST00000424898 ITGA11Q9UKX5 1188 aa13.16□□□□□ -0.3
PDZD9-201ENST00000424898 SSX2IPQ9Y2D8 614 aa13.16□□□□□ -0.3
PDZD9-201ENST00000424898 NUB1Q9Y5A7 615 aa13.16□□□□□ -0.3
PDZD9-201ENST00000424898 SF3B1O75533 1304 aaKnown RBP eCLIP13.15□□□□□ -0.3
PDZD9-201ENST00000424898 FRYLO94915 3013 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 IKBKBO14920 756 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 STX10O60499 249 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 SOD2P04179 222 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 ADRB1P08588 477 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 CCDC192P0DO97 292 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 PNPLA4P41247 253 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 RBP5P82980 135 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 BFSP1Q12934 665 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 USP41Q3LFD5 358 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 CCDC40Q4G0X9 1142 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 C9orf57Q5W0N0 161 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 PHLDB3Q6NSJ2 640 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 FUT10Q6P4F1 479 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 PPFIBP1Q86W92 1011 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 SLC44A3Q8N4M1 653 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 HASPINQ8TF76 798 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 EEF2KMTQ96G04 330 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 ZNF560Q96MR9 790 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 SRRTQ9BXP5 876 aaKnown RBP13.15□□□□□ -0.3
PDZD9-201ENST00000424898 MTMR12Q9C0I1 747 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 NAT10Q9H0A0 1025 aaKnown RBP13.15□□□□□ -0.3
PDZD9-201ENST00000424898 ARMCX3Q9UH62 379 aaPredicted RBP13.15□□□□□ -0.3
PDZD9-201ENST00000424898 USP18Q9UMW8 372 aa13.15□□□□□ -0.3
PDZD9-201ENST00000424898 CACNA1IQ9P0X4 2223 aa13.15□□□□□ -0.31
PDZD9-201ENST00000424898 USP24Q9UPU5 2620 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 CFAP47Q6ZTR5 3102 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 ANO9A1A5B4 782 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 ARHGEF37A1IGU5 675 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 F8W810 466 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 PIRO00625 290 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 PHACTR2O75167 634 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 ITGB3P05106 788 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 KRT19P08727 400 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 SRFP11831 508 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 GUCY2FP51841 1108 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 CLDN10P78369 228 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 MYO1EQ12965 1108 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 LMBRD2Q68DH5 695 aaPredicted RBP13.14□□□□□ -0.31
PDZD9-201ENST00000424898 C1orf127Q8N9H9 656 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 GPR152Q8TDT2 470 aa13.14□□□□□ -0.31
PDZD9-201ENST00000424898 BCL7CQ8WUZ0 217 aaPredicted RBP13.14□□□□□ -0.31
PDZD9-201ENST00000424898 ATRIPQ8WXE1 791 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms