RNA–Protein interactions for RNA: ENST00000424369.5

TRIM6-204, Transcript of tripartite motif containing 6, humanhuman

TSL 3

Gene TRIM6, Length 468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-204ENST00000424369 PDGFRBP09619 1106 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 ELF1P32519 619 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 PNPLA4P41247 253 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 VAMP7P51809 220 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 CDH8P55286 799 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 STX17P56962 302 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 CLDN10P78369 228 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 PPP3CAQ08209 521 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 GPR17Q13304 367 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 MYBPC2Q14324 1141 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 SLC39A12Q504Y0 691 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 LIN9Q5TKA1 542 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 C15orf39Q6ZRI6 1047 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 METTL23Q86XA0 190 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 FAM186BQ8IYM0 893 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 TCEAL8Q8IYN2 117 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 ITFG1Q8TB96 612 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 ZNF560Q96MR9 790 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 NECTIN4Q96NY8 510 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 MYADMQ96S97 322 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 DUSP9Q99956 384 aaKnown RBP11.3□□□□□ -0.6
TRIM6-204ENST00000424369 MRPL45Q9BRJ2 306 aaKnown RBP11.3□□□□□ -0.6
TRIM6-204ENST00000424369 ZCWPW1Q9H0M4 648 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 XYLT2Q9H1B5 865 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 SMOC2Q9H3U7 446 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 MMRN2Q9H8L6 949 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 WDR6Q9NNW5 1121 aaKnown RBP11.3□□□□□ -0.6
TRIM6-204ENST00000424369 ZDHHC7Q9NXF8 308 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 GDAP2Q9NXN4 497 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 DDX43Q9NXZ2 648 aaKnown RBP11.3□□□□□ -0.6
TRIM6-204ENST00000424369 NXF1Q9UBU9 619 aaKnown RBP11.3□□□□□ -0.6
TRIM6-204ENST00000424369 DPP7Q9UHL4 492 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 NME7Q9Y5B8 376 aa11.3□□□□□ -0.6
TRIM6-204ENST00000424369 ARHGEF37A1IGU5 675 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 MTMR11A4FU01 709 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 OR6C75A6NL08 312 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 PAPLNO95428 1278 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 PSMC2P35998 433 aaKnown RBP11.29□□□□□ -0.6
TRIM6-204ENST00000424369 GCLMP48507 274 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 TWF1Q12792 350 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 MYO1EQ12965 1108 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 BIRC3Q13489 604 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 TRPC3Q13507 836 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 NFIL3Q16649 462 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 UVSSAQ2YD98 709 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 WDR72Q3MJ13 1102 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 COBLL1Q53SF7 1204 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 TPGS2Q68CL5 300 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 SPOPLQ6IQ16 392 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 CCDC149Q6ZUS6 474 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 SV2AQ7L0J3 742 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 LIMS2Q7Z4I7 341 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 THEM5Q8N1Q8 247 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 GPT2Q8TD30 523 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 TMC2Q8TDI7 906 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 GPR152Q8TDT2 470 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 KBTBD7Q8WVZ9 684 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 TCEAL4Q96EI5 215 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 MMS19Q96T76 1030 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 PI4K2AQ9BTU6 479 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 CEP72Q9P209 647 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 KIAA1468Q9P260 1216 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 AFF4Q9UHB7 1163 aaKnown RBP11.29□□□□□ -0.6
TRIM6-204ENST00000424369 GTF3C4Q9UKN8 822 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 DSEQ9UL01 958 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 R3HCC1Q9Y3T6 440 aaKnown RBP11.29□□□□□ -0.6
TRIM6-204ENST00000424369 INSL5Q9Y5Q6 135 aa11.29□□□□□ -0.6
TRIM6-204ENST00000424369 NOTCH4Q99466 2003 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 MYBPHLA2RUH7 354 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 FAM86C2PA6NEL3 165 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 GABRDO14764 452 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 RHOP08100 348 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 HNRNPA1P09651 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRIM6-204ENST00000424369 GJA1P17302 382 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 PAX3P23760 479 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 FSHRP23945 695 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 CCNE1P24864 410 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 RPL13P26373 211 aaKnown RBP11.28□□□□□ -0.6
TRIM6-204ENST00000424369 GBP2P32456 591 aaPredicted RBP11.28□□□□□ -0.6
TRIM6-204ENST00000424369 RAP1GAPP47736 663 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 GPR15P49685 360 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 PSMC1P62191 440 aaKnown RBP11.28□□□□□ -0.6
TRIM6-204ENST00000424369 NCOA4Q13772 614 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 SLC5A9Q2M3M2 681 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 EDRF1Q3B7T1 1238 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 SDHAF4Q5VUM1 108 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 ELMSAN1Q6PJG2 1045 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 GET4Q7L5D6 327 aaPredicted RBP11.28□□□□□ -0.6
TRIM6-204ENST00000424369 ADGRF2Q8IZF7 708 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 STKLD1Q8NE28 680 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 NELFBQ8WX92 580 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 RSAD2Q8WXG1 361 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 ING5Q8WYH8 240 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 CORO1BQ9BR76 489 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 RHOBTB2Q9BYZ6 727 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 SDCBP2Q9H190 292 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 DNAJC25Q9H1X3 360 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 CLSTN2Q9H4D0 955 aa11.28□□□□□ -0.6
TRIM6-204ENST00000424369 CTNND2Q9UQB3 1225 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms