RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 NOLC1Q14978 699 aaKnown RBP eCLIP18.21■□□□□ 0.51
CHCHD3-202ENST00000423635 SEZ6Q53EL9 994 aa18.21■□□□□ 0.51
CHCHD3-202ENST00000423635 TMEM130Q8N3G9 435 aa18.21■□□□□ 0.51
CHCHD3-202ENST00000423635 C4orf32Q8N8J7 132 aa18.21■□□□□ 0.51
CHCHD3-202ENST00000423635 CHFRQ96EP1 664 aa18.21■□□□□ 0.51
CHCHD3-202ENST00000423635 DRC1Q96MC2 740 aa18.21■□□□□ 0.51
CHCHD3-202ENST00000423635 SLC46A2Q9BY10 475 aa18.21■□□□□ 0.51
CHCHD3-202ENST00000423635 IL21Q9HBE4 155 aa18.21■□□□□ 0.51
CHCHD3-202ENST00000423635 GKN1Q9NS71 199 aa18.21■□□□□ 0.51
CHCHD3-202ENST00000423635 LRWD1Q9UFC0 647 aa18.21■□□□□ 0.51
CHCHD3-202ENST00000423635 KCNG1Q9UIX4 513 aa18.21■□□□□ 0.51
CHCHD3-202ENST00000423635 SPEGQ15772 3267 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 TTC26A0AVF1 554 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 JAK2O60674 1132 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 LARGE1O95461 756 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 TUFMP49411 452 aaKnown RBP18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 MCL1Q07820 350 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 RUNX3Q13761 415 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 OVOS1Q6IE37 1185 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 RINT1Q6NUQ1 792 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 ZPBP2Q6X784 338 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 DSTYKQ6XUX3 929 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 C1orf186Q6ZWK4 172 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 TTC9BQ8N6N2 239 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 TMEM121BQ9BXQ6 578 aaPredicted RBP18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 HPS4Q9NQG7 708 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 ZMYM5Q9UJ78 669 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 UBQLN1Q9UMX0 589 aaKnown RBP18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 DNM3Q9UQ16 869 aa18.2■□□□□ 0.5
CHCHD3-202ENST00000423635 OTOL1A6NHN0 477 aaPredicted RBP18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 E9PMD0 336 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 SLC16A4O15374 487 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 CLDN3O15551 220 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 SOAT2O75908 522 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 RHOBTB1O94844 696 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 CLTAP09496 248 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 CXCL8P10145 99 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 CDC25CP30307 473 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 NOVA1P51513 510 aaKnown RBP18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 FOSBP53539 338 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 SPAG1Q07617 926 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 STRN3Q13033 797 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 SAFBQ15424 915 aaKnown RBP eCLIP18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 TCEAL6Q6IPX3 200 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 ARMCX5Q6P1M9 558 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 SPIRE2Q8WWL2 714 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 TCEAL3Q969E4 200 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 KIF12Q96FN5 646 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 EDEM2Q9BV94 578 aa18.19■□□□□ 0.5
CHCHD3-202ENST00000423635 KIF26AQ9ULI4 1882 aaPredicted RBP18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 EML5Q05BV3 1969 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 C4orf47A7E2U8 309 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 SFI1A8K8P3 1242 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 GIPC1O14908 333 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 RNF40O75150 1001 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 DRD1P21728 446 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 PAX3P23760 479 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 ANAPC15P60006 121 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 CYP4F8P98187 520 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 AMPD2Q01433 879 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 CMTM8Q8IZV2 173 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 IGSF22Q8N9C0 903 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 TMEM161BQ8NDZ6 487 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 TSPAN18Q96SJ8 248 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 LPIN3Q9BQK8 851 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 RUSC1Q9BVN2 902 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 TIPINQ9BVW5 301 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 HAPLN2Q9GZV7 340 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 FOXP1Q9H334 677 aaPredicted RBP18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 FBRSL1Q9HCM7 1045 aaKnown RBP18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 ANKFY1Q9P2R3 1169 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 EBF1Q9UH73 591 aa18.18■□□□□ 0.5
CHCHD3-202ENST00000423635 BCLAF3A2AJT9 711 aaKnown RBP18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 TMEM8BA6NDV4 472 aa18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 CAVIN2O95810 425 aa18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 EGFP01133 1207 aa18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 ADRB2P07550 413 aa18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 GALK1P51570 392 aa18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 LILRA4P59901 499 aa18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 KARSQ15046 597 aaKnown RBP18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 ELF2Q15723 593 aa18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 FBXO43Q4G163 708 aa18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 TTC38Q5R3I4 469 aa18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 DAB2IPQ5VWQ8 1189 aa18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 SYT13Q7L8C5 426 aa18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 SNX29Q8TEQ0 813 aa18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 SMG9Q9H0W8 520 aaKnown RBP18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 EBF3Q9H4W6 596 aa18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 POLR3BQ9NW08 1133 aaPredicted RBP18.17■□□□□ 0.5
CHCHD3-202ENST00000423635 SOBPA7XYQ1 873 aa18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 LACTBL1A8MY62 500 aa18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 XPOTO43592 962 aaKnown RBP18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 MAPTP10636 758 aaKnown RBP18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 CEACAM1P13688 526 aa18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 HOXB3P14651 431 aaPredicted RBP18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 ATF6P18850 670 aa18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 GUCY2CP25092 1073 aa18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 TRAPPC10P48553 1259 aa18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 CREB5Q02930 508 aa18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 VEPH1Q14D04 833 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms