RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ATXN3LQ9H3M9 355 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 ASB7Q9H672 318 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 AGO2Q9UKV8 859 aaKnown RBP17.48■□□□□ 0.39
COL18A1-205ENST00000423214 DSEQ9UL01 958 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 RAB23Q9ULC3 237 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 SOAT2O75908 522 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 CYP11A1P05108 521 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 CCNE1P24864 410 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 GABRR2P28476 465 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 TXLNAP40222 546 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 TAF6P49848 677 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 FZD5Q13467 585 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 PUM1Q14671 1186 aaKnown RBP eCLIP17.47■□□□□ 0.39
COL18A1-205ENST00000423214 ZC2HC1CQ53FD0 456 aaPredicted RBP17.47■□□□□ 0.39
COL18A1-205ENST00000423214 STXBP5Q5T5C0 1151 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 GPR158Q5T848 1215 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 C1orf228Q6PIY5 440 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 GPR161Q8N6U8 529 aaKnown RBP17.47■□□□□ 0.39
COL18A1-205ENST00000423214 FIZ1Q96SL8 496 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 PYM1Q9BRP8 204 aaKnown RBP17.47■□□□□ 0.39
COL18A1-205ENST00000423214 LRRC3Q9BY71 257 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 HSFX1Q9UBD0 423 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 C2CD2Q9Y426 696 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 ATG2BQ96BY7 2078 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 ANAPC1Q9H1A4 1944 aa17.47■□□□□ 0.39
COL18A1-205ENST00000423214 SLC38A8A6NNN8 435 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 TISP43B9A030 160 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 ANKRD63C9JTQ0 380 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 TULP1O00294 542 aaPredicted RBP17.46■□□□□ 0.39
COL18A1-205ENST00000423214 CHADO15335 359 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 LILRB5O75023 590 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 TUFMP49411 452 aaKnown RBP17.46■□□□□ 0.39
COL18A1-205ENST00000423214 LRRC32Q14392 662 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 TAF12Q16514 161 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 MGAT5BQ3V5L5 792 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 DYMQ7RTS9 669 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 SFR1Q86XK3 245 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 THEM5Q8N1Q8 247 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 OR10T2Q8NGX3 314 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 POMGNT1Q8WZA1 660 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 NELL1Q92832 810 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 HVCN1Q96D96 273 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 ZNF560Q96MR9 790 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 CCSER1Q9C0I3 900 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 C8orf33Q9H7E9 229 aaPredicted RBP17.46■□□□□ 0.39
COL18A1-205ENST00000423214 LMAN1LQ9HAT1 526 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 STK17AQ9UEE5 414 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 CCDC39Q9UFE4 941 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 GMEB2Q9UKD1 530 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 GREB1Q4ZG55 1949 aa17.46■□□□□ 0.39
COL18A1-205ENST00000423214 MYO16Q9Y6X6 1858 aa17.46■□□□□ 0.38
COL18A1-205ENST00000423214 ANO9A1A5B4 782 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 ARNTLO00327 626 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 PIRO00625 290 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 CYB561D2O14569 222 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 CDC25CP30307 473 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 FCHO2Q0JRZ9 810 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 SV2CQ496J9 727 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 ARHGAP29Q52LW3 1261 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 GAREM2Q75VX8 874 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 DNAJB7Q7Z6W7 309 aaPredicted RBP17.45■□□□□ 0.38
COL18A1-205ENST00000423214 ARID3BQ8IVW6 561 aaPredicted RBP17.45■□□□□ 0.38
COL18A1-205ENST00000423214 ZNF687Q8N1G0 1237 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 RSPRY1Q96DX4 576 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 LPIN3Q9BQK8 851 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 ZCWPW1Q9H0M4 648 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 ST6GALNAC4Q9H4F1 302 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 DPP3Q9NY33 737 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 SEL1LQ9UBV2 794 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 PTPRDP23468 1912 aa17.45■□□□□ 0.38
COL18A1-205ENST00000423214 KIAA1549LQ6ZVL6 1849 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 IL18RAPO95256 599 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 PDCP20941 246 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 DDIT3P35638 169 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 MLLT6P55198 1093 aaPredicted RBP17.44■□□□□ 0.38
COL18A1-205ENST00000423214 CYP4F8P98187 520 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 SMARCB1Q12824 385 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 POSTNQ15063 836 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 GPIHBP1Q8IV16 184 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 SPPL2BQ8TCT7 592 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 C2orf15Q8WU43 125 aaKnown RBP17.44■□□□□ 0.38
COL18A1-205ENST00000423214 EPSTI1Q96J88 318 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 MRPL44Q9H9J2 332 aaKnown RBP17.44■□□□□ 0.38
COL18A1-205ENST00000423214 OBP2AQ9NY56 170 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 ABI2Q9NYB9 513 aaPredicted RBP17.44■□□□□ 0.38
COL18A1-205ENST00000423214 USP18Q9UMW8 372 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 EXOC7Q9UPT5 735 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 STYXL1Q9Y6J8 313 aa17.44■□□□□ 0.38
COL18A1-205ENST00000423214 EML5Q05BV3 1969 aa17.43■□□□□ 0.38
COL18A1-205ENST00000423214 SPECC1L-ADORA2AF8WAN1 911 aa17.43■□□□□ 0.38
COL18A1-205ENST00000423214 CHRNB1P11230 501 aa17.43■□□□□ 0.38
COL18A1-205ENST00000423214 GAP43P17677 238 aa17.43■□□□□ 0.38
COL18A1-205ENST00000423214 ATF6P18850 670 aa17.43■□□□□ 0.38
COL18A1-205ENST00000423214 CXCL12P48061 93 aa17.43■□□□□ 0.38
COL18A1-205ENST00000423214 SOX9P48436 509 aa17.43■□□□□ 0.38
COL18A1-205ENST00000423214 CDR1P51861 262 aa17.43■□□□□ 0.38
COL18A1-205ENST00000423214 PLCB2Q00722 1185 aa17.43■□□□□ 0.38
COL18A1-205ENST00000423214 RSPO4Q2I0M5 234 aaPredicted RBP17.43■□□□□ 0.38
COL18A1-205ENST00000423214 NT5DC4Q86YG4 428 aa17.43■□□□□ 0.38
COL18A1-205ENST00000423214 EFCAB13Q8IY85 973 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms