RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 RHOT1Q8IXI2 618 aa17.58■□□□□ 0.4
NPC1L1-203ENST00000423141 PDCD7Q8N8D1 485 aaKnown RBP17.58■□□□□ 0.4
NPC1L1-203ENST00000423141 ZNF398Q8TD17 642 aa17.58■□□□□ 0.4
NPC1L1-203ENST00000423141 POMGNT1Q8WZA1 660 aa17.58■□□□□ 0.4
NPC1L1-203ENST00000423141 SKA1Q96BD8 255 aa17.58■□□□□ 0.4
NPC1L1-203ENST00000423141 TMEM120AQ9BXJ8 343 aa17.58■□□□□ 0.4
NPC1L1-203ENST00000423141 MANSC1Q9H8J5 431 aa17.58■□□□□ 0.4
NPC1L1-203ENST00000423141 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.58■□□□□ 0.4
NPC1L1-203ENST00000423141 ATF7P17544 494 aaPredicted RBP17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 ARFIP2P53365 341 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 SEPT7Q16181 437 aaKnown RBP17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 PDCD2Q16342 344 aaPredicted RBP17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 CEP55Q53EZ4 464 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 PRR5LQ6MZQ0 368 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 FAM43BQ6ZT52 329 aaPredicted RBP17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 C12orf56Q8IXR9 622 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 EZH1Q92800 747 aaPredicted RBP17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 C11orf70Q9BRQ4 267 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 AVENQ9NQS1 362 aaPredicted RBP17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 CLUHO75153 1309 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 ALOX15BO15296 676 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 PYGLP06737 847 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 GPC3P51654 580 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 JAG1P78504 1218 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 CUL3Q13618 768 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 KATNAL2Q8IYT4 538 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 LARGE2Q8N3Y3 721 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 PPFIBP2Q8ND30 876 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 KIFC3Q9BVG8 833 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 TRIM55Q9BYV6 548 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 FOXP3Q9BZS1 431 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 ARHGEF4Q9NR80 690 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 RAB20Q9NX57 234 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 ZBTB21Q9ULJ3 1066 aa17.57■□□□□ 0.4
NPC1L1-203ENST00000423141 PSTPIP1O43586 416 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 GSTT1P30711 240 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 GEMIN4P57678 1058 aaKnown RBP17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 OGFOD1Q8N543 542 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 TAB3Q8N5C8 712 aaPredicted RBP17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 DRAXINQ8NBI3 349 aaPredicted RBP17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 FBXL13Q8NEE6 735 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 B4GALNT2Q8NHY0 566 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 ACSF2Q96CM8 615 aaPredicted RBP17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 GBP5Q96PP8 586 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 TSSK1BQ9BXA7 367 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 OCEL1Q9H607 264 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 SLC24A2Q9UI40 661 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 RABGEF1Q9UJ41 708 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 PRR12Q9ULL5 1215 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 PMM2O15305 246 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 IFNB1P01574 187 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 ESRRAP11474 423 aaPredicted RBP17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 GLRA2P23416 452 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 DSG3P32926 999 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 PSMC4P43686 418 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 NSFP46459 744 aaKnown RBP17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 CDK16Q00536 496 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 PTP4A2Q12974 167 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 NFX1Q12986 1120 aaKnown RBP17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 TBC1D25Q3MII6 688 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 MSS51Q4VC12 460 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 EFHC2Q5JST6 749 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 ZFYVE27Q5T4F4 411 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 RNASEH2BQ5TBB1 312 aaKnown RBP17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 NLRX1Q86UT6 975 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 C10orf88Q9H8K7 445 aa17.56■□□□□ 0.4
NPC1L1-203ENST00000423141 LYNP07948 512 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 RARBP10826 455 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 PEX3P56589 373 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 RC3H1Q5TC82 1133 aaKnown RBP17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 SV2AQ7L0J3 742 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 MON1BQ7L1V2 547 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 ALYREFQ86V81 257 aaKnown RBP17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 ALLCQ8N6M5 410 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 MZB1Q8WU39 189 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 FAM161BQ96MY7 647 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 TUBGCP5Q96RT8 1024 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 PAFAH2Q99487 392 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 UBE2OQ9C0C9 1292 aaKnown RBP17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 TMEM8AQ9HCN3 771 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 COQ4Q9Y3A0 265 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 IPO5O00410 1097 aaKnown RBP17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 DLDP09622 509 aaKnown RBP17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 PGM1P36871 562 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 CCDC174Q6PII3 467 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 B3GNT9Q6UX72 402 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 MFSD7Q6UXD7 560 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 BANPQ8N9N5 519 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 EXD1Q8NHP7 514 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 CLPTM1LQ96KA5 538 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 WDR83Q9BRX9 315 aaKnown RBP17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 TMEM121Q9BTD3 319 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 NMUR2Q9GZQ4 415 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 ZNF212Q9UDV6 495 aa17.55■□□□□ 0.4
NPC1L1-203ENST00000423141 DENND3A2RUS2 1198 aa17.54■□□□□ 0.4
NPC1L1-203ENST00000423141 ARL4CP56559 192 aa17.54■□□□□ 0.4
NPC1L1-203ENST00000423141 GTF2BQ00403 316 aa17.54■□□□□ 0.4
NPC1L1-203ENST00000423141 MAMLD1Q13495 774 aa17.54■□□□□ 0.4
NPC1L1-203ENST00000423141 EAPPQ56P03 285 aaPredicted RBP17.54■□□□□ 0.4
NPC1L1-203ENST00000423141 MDH1BQ5I0G3 518 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms